Analysis of Ligand-Protein Contacts in PDB entry:
7AGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 7AGD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BOC
I
1 7TERT-BUTYL HYDROGEN CARBONATE
lig 2
PSA
I
4 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 3
PSA
I
6 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 4
BOC
J
1 7TERT-BUTYL HYDROGEN CARBONATE
lig 5
PSA
J
4 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 6
PSA
J
6 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 7
BOC
K
1 7TERT-BUTYL HYDROGEN CARBONATE
lig 8
PSA
K
4 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 9
PSA
K
6 103-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 10
BOC
L
1 7TERT-BUTYL HYDROGEN CARBONATE
lig 11
PSA
L
4 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 12
PSA
L
6 143-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
lig 13
1PE
A
401 15PENTAETHYLENE GLYCOL
lig 14
PEG
A
402 7DI(HYDROXYETHYL)ETHER
lig 15
PGE
B
401 10TRIETHYLENE GLYCOL
lig 16
MES
B
402 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 17
PGE
C
401 9TRIETHYLENE GLYCOL
lig 18
NA
D
401 1SODIUM ION
lig 19
PGE
D
402 10TRIETHYLENE GLYCOL
lig 20
1PE
D
403 13PENTAETHYLENE GLYCOL
lig 21
FOR
J
101 2FORMYL GROUP