Analysis of Ligand-Protein Contacts in PDB entry:
7APP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 7APP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NA
A
302 1SODIUM ION
lig 3
FMT
A
303 3FORMIC ACID
lig 4
FMT
A
304 3FORMIC ACID
lig 5
FMT
A
305 3FORMIC ACID
lig 6
FMT
A
306 3FORMIC ACID
lig 7
FMT
A
307 3FORMIC ACID
lig 8
FMT
A
308 3FORMIC ACID
lig 9
FMT
A
309 3FORMIC ACID
lig 10
FMT
A
310 3FORMIC ACID
lig 11
FMT
A
311 3FORMIC ACID
lig 12
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NA
B
302 1SODIUM ION
lig 14
NA
B
303 1SODIUM ION
lig 15
FMT
B
304 3FORMIC ACID
lig 16
FMT
B
305 3FORMIC ACID
lig 17
FMT
B
306 3FORMIC ACID
lig 18
FMT
B
307 3FORMIC ACID
lig 19
FMT
B
308 3FORMIC ACID
lig 20
FMT
B
309 3FORMIC ACID