Analysis of Ligand-Protein Contacts in PDB entry:
7B93


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 7B93. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AME
q
1 11N-ACETYLMETHIONINE
lig 10
AYA
r
1 8N-ACETYLALANINE
lig 11
SF4
B
201 8IRON/SULFUR CLUSTER
lig 12
PC1
B
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 13
PC1
B
203 431,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
3PE
D
501 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 15
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 16
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 17
SF4
F
502 8IRON/SULFUR CLUSTER
lig 18
SF4
G
801 8IRON/SULFUR CLUSTER
lig 19
SF4
G
802 8IRON/SULFUR CLUSTER
lig 20
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 21
3PE
H
401 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
PC1
H
402 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
T2Q
H
403 40 YL]PYRIDIN-2-ONE
lig 24
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
PC1
I
202 451,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
SF4
I
203 8IRON/SULFUR CLUSTER
lig 27
SF4
I
204 8IRON/SULFUR CLUSTER
lig 28
3PE
K
201 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 29
3PE
L
701 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
L
702 74CARDIOLIPIN
lig 31
3PE
M
501 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
CDL
N
401 65CARDIOLIPIN
lig 33
ATP
O
401 31ADENOSINE-5'-TRIPHOSPHATE
lig 34
NDP
P
501 48 PHOSPHATE
lig 35
ZN
R
201 1ZINC ION
lig 36
EHZ
T
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 37
EHZ
U
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 38
CDL
X
201 67CARDIOLIPIN
lig 39
3PE
Y
401 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 40
CDL
d
201 59CARDIOLIPIN
lig 41
CDL
d
202 63CARDIOLIPIN
lig 42
CDL
h
201 70CARDIOLIPIN
lig 43
3PE
h
202 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
3PE
i
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
CDL
q
201 57CARDIOLIPIN