Analysis of Ligand-Protein Contacts in PDB entry:
7CDA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 7CDA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
GOL
A
504 6GLYCEROL
lig 5
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
B
502 1MAGNESIUM ION
lig 7
MES
B
503 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 8
AEU
B
504 28N-[(3-PHENOXYPHENYL)METHYL]-9H-BETA-CARBOL
lig 9
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
MG
C
502 1MAGNESIUM ION
lig 11
CA
C
503 1CALCIUM ION
lig 12
GTP
D
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 13
AEU
D
502 28N-[(3-PHENOXYPHENYL)METHYL]-9H-BETA-CARBOL
lig 14
MG
D
503 1MAGNESIUM ION
lig 15
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST