Analysis of Ligand-Protein Contacts in PDB entry:
7D3E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 7D3E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
E
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
E
9 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
E
10 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 21
HEM
A
1601 43PROTOPORPHYRIN IX CONTAINING FE
lig 22
HEM
A
1602 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
NDP
A
1603 48 PHOSPHATE
lig 24
FAD
A
1604 53FLAVIN-ADENINE DINUCLEOTIDE
lig 25
NAG
A
1605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
1606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
A
1607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NA
A
1608 1SODIUM ION
lig 29
NA
A
1609 1SODIUM ION
lig 30
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
B
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
HEM
C
1601 43PROTOPORPHYRIN IX CONTAINING FE
lig 33
HEM
C
1602 43PROTOPORPHYRIN IX CONTAINING FE
lig 34
NDP
C
1603 48 PHOSPHATE
lig 35
FAD
C
1604 53FLAVIN-ADENINE DINUCLEOTIDE
lig 36
NAG
C
1605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
C
1606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
C
1607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NA
C
1608 1SODIUM ION
lig 40
NA
C
1609 1SODIUM ION
lig 41
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
D
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE