Analysis of Ligand-Protein Contacts in PDB entry:
7D4B


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 7D4B. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
FUC
C
7 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 11
CL
A
201 1CHLORIDE ION
lig 12
CL
A
202 1CHLORIDE ION
lig 13
SO4
A
203 5SULFATE ION
lig 14
SO4
A
204 5SULFATE ION
lig 15
CL
B
201 1CHLORIDE ION
lig 16
EDO
B
202 41,2-ETHANEDIOL
lig 17
EDO
B
203 41,2-ETHANEDIOL
lig 18
SO4
B
204 5SULFATE ION