Analysis of Ligand-Protein Contacts in PDB entry:
7DAF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 7DAF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
CL
A
504 1CHLORIDE ION
lig 5
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
B
502 1MAGNESIUM ION
lig 7
CA
B
503 1CALCIUM ION
lig 8
MES
B
504 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 9
MES
B
505 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 10
MG
B
506 1MAGNESIUM ION
lig 11
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
MG
C
502 1MAGNESIUM ION
lig 13
CA
C
503 1CALCIUM ION
lig 14
GDP
D
501 28GUANOSINE-5'-DIPHOSPHATE
lig 15
MG
D
502 1MAGNESIUM ION
lig 16
GZX
D
503 35 AZABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE
lig 17
CA
E
201 1CALCIUM ION
lig 18
MG
F
401 1MAGNESIUM ION
lig 19
ACP
F
402 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST