Analysis of Ligand-Protein Contacts in PDB entry:
7DDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 7DDQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BCL
o
100 66BACTERIOCHLOROPHYLL A
lig 2
SPO
N
201 42SPHEROIDENE
lig 3
BCL
N
202 66BACTERIOCHLOROPHYLL A
lig 4
BCL
t
101 66BACTERIOCHLOROPHYLL A
lig 5
SPO
t
102 42SPHEROIDENE
lig 6
BCL
t
103 66BACTERIOCHLOROPHYLL A
lig 7
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 8
BCL
r
101 66BACTERIOCHLOROPHYLL A
lig 9
SPO
r
102 42SPHEROIDENE
lig 10
SPO
r
103 42SPHEROIDENE
lig 11
BCL
O
101 66BACTERIOCHLOROPHYLL A
lig 12
BCL
a
101 66BACTERIOCHLOROPHYLL A
lig 13
U10
a
102 48UBIQUINONE-10
lig 14
BCL
e
100 66BACTERIOCHLOROPHYLL A
lig 15
SPO
D
201 42SPHEROIDENE
lig 16
BCL
D
202 66BACTERIOCHLOROPHYLL A
lig 17
BCL
b
101 66BACTERIOCHLOROPHYLL A
lig 18
BCL
b
102 66BACTERIOCHLOROPHYLL A
lig 19
BCL
A
101 66BACTERIOCHLOROPHYLL A
lig 20
BCL
k
101 66BACTERIOCHLOROPHYLL A
lig 21
SPO
k
102 42SPHEROIDENE
lig 22
SPO
E
201 42SPHEROIDENE
lig 23
BCL
E
202 66BACTERIOCHLOROPHYLL A
lig 24
BCL
u
101 66BACTERIOCHLOROPHYLL A
lig 25
BCL
u
102 66BACTERIOCHLOROPHYLL A
lig 26
SPO
X
201 42SPHEROIDENE
lig 27
SPO
s
201 42SPHEROIDENE
lig 28
BCL
s
202 66BACTERIOCHLOROPHYLL A
lig 29
BCL
R
101 66BACTERIOCHLOROPHYLL A
lig 30
BCL
n
100 66BACTERIOCHLOROPHYLL A
lig 31
BCL
K
101 66BACTERIOCHLOROPHYLL A
lig 32
BCL
i
100 66BACTERIOCHLOROPHYLL A
lig 33
BCL
G
101 66BACTERIOCHLOROPHYLL A
lig 34
SPO
j
301 42SPHEROIDENE
lig 35
BCL
j
302 66BACTERIOCHLOROPHYLL A
lig 36
BCL
j
303 66BACTERIOCHLOROPHYLL A
lig 37
BCL
I
101 66BACTERIOCHLOROPHYLL A
lig 38
SPO
I
102 42SPHEROIDENE
lig 39
BCL
L
301 66BACTERIOCHLOROPHYLL A
lig 40
BPH
L
302 65BACTERIOPHEOPHYTIN A
lig 41
U10
L
303 33UBIQUINONE-10
lig 42
U10
L
304 38UBIQUINONE-10
lig 43
U10
L
305 28UBIQUINONE-10
lig 44
BPH
L
306 45BACTERIOPHEOPHYTIN A
lig 45
BCL
M
401 66BACTERIOCHLOROPHYLL A
lig 46
BCL
M
402 66BACTERIOCHLOROPHYLL A
lig 47
BPH
M
403 65BACTERIOPHEOPHYTIN A
lig 48
FE
M
404 1FE (III) ION
lig 49
U10
M
405 48UBIQUINONE-10
lig 50
SPO
M
406 42SPHEROIDENE
lig 51
BCL
M
407 66BACTERIOCHLOROPHYLL A
lig 52
U10
M
408 18UBIQUINONE-10
lig 53
3PE
H
301 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
3PE
H
302 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 55
BCL
g
101 66BACTERIOCHLOROPHYLL A
lig 56
SPO
g
102 42SPHEROIDENE
lig 57
BCL
F
101 66BACTERIOCHLOROPHYLL A
lig 58
SPO
F
102 42SPHEROIDENE
lig 59
BCL
F
103 66BACTERIOCHLOROPHYLL A
lig 60
BCL
d
101 66BACTERIOCHLOROPHYLL A
lig 61
3PE
d
102 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 62
SPO
B
101 42SPHEROIDENE