Analysis of Ligand-Protein Contacts in PDB entry:
7DFO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 84 ligands in PDB entry 7DFO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XYP
J
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
J
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
J
3 9BETA-D-XYLOPYRANOSE
lig 4
XYP
K
1 10BETA-D-XYLOPYRANOSE
lig 5
XYP
K
2 9BETA-D-XYLOPYRANOSE
lig 6
XYP
K
3 9BETA-D-XYLOPYRANOSE
lig 7
GCV
K
4 134-O-METHYL-ALPHA-D-GLUCOPYRANURONIC ACID
lig 8
XYP
K
5 9BETA-D-XYLOPYRANOSE
lig 9
XYP
L
1 10BETA-D-XYLOPYRANOSE
lig 10
XYP
L
2 9BETA-D-XYLOPYRANOSE
lig 11
XYP
L
3 9BETA-D-XYLOPYRANOSE
lig 12
GCV
L
4 134-O-METHYL-ALPHA-D-GLUCOPYRANURONIC ACID
lig 13
XYP
M
1 10BETA-D-XYLOPYRANOSE
lig 14
XYP
M
2 9BETA-D-XYLOPYRANOSE
lig 15
XYP
M
3 9BETA-D-XYLOPYRANOSE
lig 16
XYP
N
1 10BETA-D-XYLOPYRANOSE
lig 17
XYP
N
2 9BETA-D-XYLOPYRANOSE
lig 18
XYP
N
3 9BETA-D-XYLOPYRANOSE
lig 19
GCV
N
4 134-O-METHYL-ALPHA-D-GLUCOPYRANURONIC ACID
lig 20
XYP
N
5 9BETA-D-XYLOPYRANOSE
lig 21
XYP
O
1 10BETA-D-XYLOPYRANOSE
lig 22
XYP
O
2 9BETA-D-XYLOPYRANOSE
lig 23
XYP
O
3 9BETA-D-XYLOPYRANOSE
lig 24
XYP
P
1 10BETA-D-XYLOPYRANOSE
lig 25
XYP
P
2 9BETA-D-XYLOPYRANOSE
lig 26
XYP
P
3 9BETA-D-XYLOPYRANOSE
lig 27
XYP
Q
1 10BETA-D-XYLOPYRANOSE
lig 28
XYP
Q
2 9BETA-D-XYLOPYRANOSE
lig 29
CL
A
401 1CHLORIDE ION
lig 30
CL
A
402 1CHLORIDE ION
lig 31
CL
A
403 1CHLORIDE ION
lig 32
CL
A
404 1CHLORIDE ION
lig 33
CL
A
405 1CHLORIDE ION
lig 34
NA
A
406 1SODIUM ION
lig 35
CL
B
301 1CHLORIDE ION
lig 36
CL
B
302 1CHLORIDE ION
lig 37
NA
B
303 1SODIUM ION
lig 38
CL
C
301 1CHLORIDE ION
lig 39
CL
C
302 1CHLORIDE ION
lig 40
CL
C
303 1CHLORIDE ION
lig 41
CL
C
304 1CHLORIDE ION
lig 42
CL
C
305 1CHLORIDE ION
lig 43
CL
C
306 1CHLORIDE ION
lig 44
NA
C
307 1SODIUM ION
lig 45
CL
D
301 1CHLORIDE ION
lig 46
CL
D
302 1CHLORIDE ION
lig 47
CL
D
303 1CHLORIDE ION
lig 48
NA
D
304 1SODIUM ION
lig 49
NA
D
305 1SODIUM ION
lig 50
NA
D
306 1SODIUM ION
lig 51
NA
D
307 1SODIUM ION
lig 52
CL
D
308 1CHLORIDE ION
lig 53
CL
D
309 1CHLORIDE ION
lig 54
CL
E
301 1CHLORIDE ION
lig 55
CL
E
302 1CHLORIDE ION
lig 56
CL
E
303 1CHLORIDE ION
lig 57
CL
E
304 1CHLORIDE ION
lig 58
CL
E
305 1CHLORIDE ION
lig 59
NA
E
306 1SODIUM ION
lig 60
CL
F
301 1CHLORIDE ION
lig 61
CL
F
302 1CHLORIDE ION
lig 62
NA
F
303 1SODIUM ION
lig 63
CL
G
301 1CHLORIDE ION
lig 64
CL
G
302 1CHLORIDE ION
lig 65
CL
G
303 1CHLORIDE ION
lig 66
CL
G
304 1CHLORIDE ION
lig 67
CL
H
301 1CHLORIDE ION
lig 68
CL
H
302 1CHLORIDE ION
lig 69
CL
H
303 1CHLORIDE ION
lig 70
CL
H
304 1CHLORIDE ION
lig 71
CL
I
301 1CHLORIDE ION
lig 72
CL
I
302 1CHLORIDE ION
lig 73
CL
I
303 1CHLORIDE ION
lig 74
CL
I
304 1CHLORIDE ION
lig 75
CL
I
305 1CHLORIDE ION
lig 76
CL
I
306 1CHLORIDE ION
lig 77
CL
I
307 1CHLORIDE ION
lig 78
CL
I
308 1CHLORIDE ION
lig 79
CL
I
309 1CHLORIDE ION
lig 80
CL
I
310 1CHLORIDE ION
lig 81
NA
I
311 1SODIUM ION
lig 82
NA
I
312 1SODIUM ION
lig 83
NA
I
313 1SODIUM ION
lig 84
NA
I
314 1SODIUM ION