Analysis of Ligand-Protein Contacts in PDB entry:
7DXQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 36 ligands in PDB entry 7DXQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
431 10PHOSPHOSERINE
lig 2
TPO
A
432 11PHOSPHOTHREONINE
lig 3
SEP
B
431 10PHOSPHOSERINE
lig 4
TPO
B
432 11PHOSPHOTHREONINE
lig 5
SEP
E
431 10PHOSPHOSERINE
lig 6
TPO
E
432 11PHOSPHOTHREONINE
lig 7
SEP
F
431 10PHOSPHOSERINE
lig 8
TPO
F
432 11PHOSPHOTHREONINE
lig 9
SEP
C
431 10PHOSPHOSERINE
lig 10
TPO
C
432 11PHOSPHOTHREONINE
lig 11
SEP
D
431 10PHOSPHOSERINE
lig 12
TPO
D
432 11PHOSPHOTHREONINE
lig 13
ATP
A
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 14
ATP
A
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
MG
A
603 1MAGNESIUM ION
lig 16
MG
A
604 1MAGNESIUM ION
lig 17
ATP
B
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 18
ATP
B
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 19
MG
B
603 1MAGNESIUM ION
lig 20
MG
B
604 1MAGNESIUM ION
lig 21
ATP
E
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 22
ATP
E
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 23
MG
E
603 1MAGNESIUM ION
lig 24
MG
E
604 1MAGNESIUM ION
lig 25
ATP
F
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 26
ATP
F
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 27
MG
F
603 1MAGNESIUM ION
lig 28
MG
F
604 1MAGNESIUM ION
lig 29
ATP
C
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 30
ATP
C
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 31
MG
C
603 1MAGNESIUM ION
lig 32
MG
C
604 1MAGNESIUM ION
lig 33
ATP
D
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 34
ATP
D
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 35
MG
D
603 1MAGNESIUM ION
lig 36
MG
D
604 1MAGNESIUM ION