Analysis of Ligand-Protein Contacts in PDB entry:
7EQD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 108 ligands in PDB entry 7EQD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
D
1 10N-FORMYLMETHIONINE
lig 3
FME
F
1 10N-FORMYLMETHIONINE
lig 4
FME
I
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
O
1 10N-FORMYLMETHIONINE
lig 7
FME
Q
1 10N-FORMYLMETHIONINE
lig 8
FME
S
1 10N-FORMYLMETHIONINE
lig 9
FME
U
1 10N-FORMYLMETHIONINE
lig 10
FME
W
1 10N-FORMYLMETHIONINE
lig 11
FME
Y
1 10N-FORMYLMETHIONINE
lig 12
FME
1
1 10N-FORMYLMETHIONINE
lig 13
FME
3
1 10N-FORMYLMETHIONINE
lig 14
FME
5
1 10N-FORMYLMETHIONINE
lig 15
FME
7
1 10N-FORMYLMETHIONINE
lig 16
FME
9
1 10N-FORMYLMETHIONINE
lig 17
07D
L
301 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 18
08I
L
302 65TRANS-GERANYL BACTERIOPHEOPHYTIN A
lig 19
U10
L
303 28UBIQUINONE-10
lig 20
PGV
L
304 43 OCTADEC-11-ENOATE
lig 21
LMT
L
305 28DODECYL-BETA-D-MALTOSIDE
lig 22
LMT
L
306 32DODECYL-BETA-D-MALTOSIDE
lig 23
07D
L
307 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 24
U10
M
401 18UBIQUINONE-10
lig 25
FE
M
402 1FE (III) ION
lig 26
07D
M
403 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 27
07D
M
404 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 28
08I
M
405 65TRANS-GERANYL BACTERIOPHEOPHYTIN A
lig 29
RQ0
M
406 62 2,5-DIENE-1,4-DIONE
lig 30
CRT
M
407 44SPIRILLOXANTHIN
lig 31
CDL
M
408 68CARDIOLIPIN
lig 32
CDL
M
409 68CARDIOLIPIN
lig 33
LMT
M
410 35DODECYL-BETA-D-MALTOSIDE
lig 34
LMT
M
411 29DODECYL-BETA-D-MALTOSIDE
lig 35
CDL
H
301 64CARDIOLIPIN
lig 36
PGV
H
302 36 OCTADEC-11-ENOATE
lig 37
CDL
H
303 59CARDIOLIPIN
lig 38
CDL
H
304 33CARDIOLIPIN
lig 39
PEF
H
305 13DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 40
LMT
H
306 35DODECYL-BETA-D-MALTOSIDE
lig 41
07D
A
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 42
CRT
A
102 44SPIRILLOXANTHIN
lig 43
07D
B
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 44
LMT
B
102 35DODECYL-BETA-D-MALTOSIDE
lig 45
07D
D
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 46
CRT
E
101 44SPIRILLOXANTHIN
lig 47
07D
E
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 48
LMT
E
103 35DODECYL-BETA-D-MALTOSIDE
lig 49
07D
F
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 50
CRT
G
101 44SPIRILLOXANTHIN
lig 51
07D
G
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 52
LMT
G
103 35DODECYL-BETA-D-MALTOSIDE
lig 53
07D
I
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 54
CRT
J
101 44SPIRILLOXANTHIN
lig 55
07D
J
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 56
LMT
J
103 35DODECYL-BETA-D-MALTOSIDE
lig 57
07D
K
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 58
PEF
K
102 31DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 59
PEF
K
103 42DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 60
CRT
N
101 44SPIRILLOXANTHIN
lig 61
07D
N
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 62
LMT
N
103 35DODECYL-BETA-D-MALTOSIDE
lig 63
07D
O
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 64
CRT
P
101 44SPIRILLOXANTHIN
lig 65
07D
P
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 66
LMT
P
103 35DODECYL-BETA-D-MALTOSIDE
lig 67
07D
Q
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 68
07D
Q
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 69
CRT
R
101 44SPIRILLOXANTHIN
lig 70
LMT
R
102 35DODECYL-BETA-D-MALTOSIDE
lig 71
07D
S
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 72
CRT
T
101 44SPIRILLOXANTHIN
lig 73
07D
T
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 74
LMT
T
103 35DODECYL-BETA-D-MALTOSIDE
lig 75
07D
U
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 76
CRT
V
101 44SPIRILLOXANTHIN
lig 77
07D
V
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 78
LMT
V
103 35DODECYL-BETA-D-MALTOSIDE
lig 79
07D
W
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 80
CRT
X
101 44SPIRILLOXANTHIN
lig 81
07D
X
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 82
LMT
X
103 35DODECYL-BETA-D-MALTOSIDE
lig 83
07D
Y
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 84
CRT
Z
101 44SPIRILLOXANTHIN
lig 85
07D
Z
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 86
LMT
Z
103 35DODECYL-BETA-D-MALTOSIDE
lig 87
07D
1
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 88
CRT
2
101 44SPIRILLOXANTHIN
lig 89
07D
2
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 90
LMT
2
103 35DODECYL-BETA-D-MALTOSIDE
lig 91
07D
3
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 92
CRT
4
101 44SPIRILLOXANTHIN
lig 93
07D
4
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 94
LMT
4
103 35DODECYL-BETA-D-MALTOSIDE
lig 95
LMT
5
201 31DODECYL-BETA-D-MALTOSIDE
lig 96
07D
5
202 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 97
LMT
5
203 35DODECYL-BETA-D-MALTOSIDE
lig 98
CRT
6
101 44SPIRILLOXANTHIN
lig 99
07D
6
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 100
LMT
6
103 35DODECYL-BETA-D-MALTOSIDE
lig 101
07D
7
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 102
CRT
8
101 44SPIRILLOXANTHIN
lig 103
07D
8
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 104
LMT
8
103 35DODECYL-BETA-D-MALTOSIDE
lig 105
07D
9
101 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 106
CRT
0
101 44SPIRILLOXANTHIN
lig 107
07D
0
102 66TRANS-GERANYL BACTERIOCHLOROPHYLL A
lig 108
LMT
0
103 35DODECYL-BETA-D-MALTOSIDE