Analysis of Ligand-Protein Contacts in PDB entry:
7F5J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 7F5J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HD0
A
172 17 IMIDAZOL-5-YL)PROPANOIC ACID
lig 2
HD0
B
172 17 IMIDAZOL-5-YL)PROPANOIC ACID
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
EDO
A
402 41,2-ETHANEDIOL
lig 9
EDO
A
403 41,2-ETHANEDIOL
lig 10
NAG
A
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
EDO
A
405 41,2-ETHANEDIOL
lig 12
GOL
A
406 6GLYCEROL
lig 13
EDO
A
407 41,2-ETHANEDIOL
lig 14
GOL
A
408 6GLYCEROL
lig 15
GOL
A
409 6GLYCEROL
lig 16
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
GOL
B
402 6GLYCEROL
lig 18
NAG
B
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
EDO
B
404 41,2-ETHANEDIOL
lig 20
EDO
B
405 41,2-ETHANEDIOL