Analysis of Ligand-Protein Contacts in PDB entry:
7JRP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 58 ligands in PDB entry 7JRP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZN
A
601 1ZINC ION
lig 2
PC1
A
602 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 3
CDL
A
603 51CARDIOLIPIN
lig 4
CDL
C
401 54CARDIOLIPIN
lig 5
HEM
C
402 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
HEM
C
403 43PROTOPORPHYRIN IX CONTAINING FE
lig 7
3PE
C
404 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 8
3PE
C
405 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
3PE
C
406 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 10
3PE
C
407 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 11
3PE
C
408 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 12
CDL
C
409 55CARDIOLIPIN
lig 13
HEC
D
501 43HEME C
lig 14
CDL
D
502 41CARDIOLIPIN
lig 15
3PE
F
201 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
3PE
G
101 201,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
ZN
M
601 1ZINC ION
lig 18
CDL
M
602 53CARDIOLIPIN
lig 19
PC1
M
603 271,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
3PE
O
401 241,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 21
CDL
O
402 54CARDIOLIPIN
lig 22
HEM
O
403 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
HEM
O
404 43PROTOPORPHYRIN IX CONTAINING FE
lig 24
3PE
O
405 261,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
3PE
O
406 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
3PE
O
407 261,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
3PE
P
401 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
HEC
P
402 43HEME C
lig 29
CDL
P
403 48CARDIOLIPIN
lig 30
PC1
S
101 281,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
CDL
S
102 50CARDIOLIPIN
lig 32
HEA
a
601 60HEME-A
lig 33
HEA
a
602 60HEME-A
lig 34
CU
a
603 1COPPER (II) ION
lig 35
MG
a
604 1MAGNESIUM ION
lig 36
PC1
a
605 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
3PE
a
606 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
a
607 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
CDL
a
608 67CARDIOLIPIN
lig 40
3PE
a
609 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
3PE
a
610 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
a
611 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
3PE
a
612 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
CUA
b
301 2DINUCLEAR COPPER ION
lig 45
3PE
b
302 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
3PE
b
303 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
3PE
b
304 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
c
301 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
3PE
c
302 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 50
3PE
c
303 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
3PE
c
304 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 52
3PE
c
305 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
3PE
d
101 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
ZN
e
201 1ZINC ION
lig 55
3PE
h
101 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
PC1
i
101 361,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 57
LYS
i
102 9LYSINE
lig 58
3PE
i
103 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI