Analysis of Ligand-Protein Contacts in PDB entry:
7KDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 7KDM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
FUC
J
2 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 15
ZN
A
301 1ZINC ION
lig 16
ZN
A
302 1ZINC ION
lig 17
ZN
A
303 1ZINC ION
lig 18
ZN
B
301 1ZINC ION
lig 19
CL
B
302 1CHLORIDE ION
lig 20
ZN
D
301 1ZINC ION
lig 21
ZN
D
302 1ZINC ION
lig 22
ZN
D
303 1ZINC ION
lig 23
ZN
D
304 1ZINC ION
lig 24
CL
D
305 1CHLORIDE ION
lig 25
ZN
E
301 1ZINC ION
lig 26
CL
E
302 1CHLORIDE ION