Analysis of Ligand-Protein Contacts in PDB entry:
7KJM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 7KJM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DGL
B
1 9D-GLUTAMIC ACID
lig 2
DPN
B
2 11D-PHENYLALANINE
lig 3
DTR
B
3 14D-TRYPTOPHAN
lig 4
DTY
B
4 12D-TYROSINE
lig 5
DVA
B
5 7D-VALINE
lig 6
DGL
B
6 9D-GLUTAMIC ACID
lig 7
D0C
B
7 124-CHLORO-D-PHENYLALANINE
lig 8
DGL
B
8 9D-GLUTAMIC ACID
lig 9
DLY
B
9 9D-LYSINE
lig 10
DLE
B
10 8D-LEUCINE
lig 11
DLE
B
11 8D-LEUCINE
lig 12
DAR
B
12 12D-ARGININE
lig 13
DGL
D
1 9D-GLUTAMIC ACID
lig 14
DPN
D
2 11D-PHENYLALANINE
lig 15
DTR
D
3 14D-TRYPTOPHAN
lig 16
DTY
D
4 12D-TYROSINE
lig 17
DVA
D
5 7D-VALINE
lig 18
DGL
D
6 9D-GLUTAMIC ACID
lig 19
D0C
D
7 124-CHLORO-D-PHENYLALANINE
lig 20
DGL
D
8 9D-GLUTAMIC ACID
lig 21
DLY
D
9 9D-LYSINE
lig 22
DLE
D
10 8D-LEUCINE
lig 23
DLE
D
11 8D-LEUCINE
lig 24
DAR
D
12 12D-ARGININE
lig 25
PEG
A
201 7DI(HYDROXYETHYL)ETHER
lig 26
IPA
A
202 4ISOPROPYL ALCOHOL
lig 27
CL
A
203 1CHLORIDE ION
lig 28
CL
A
204 1CHLORIDE ION