Analysis of Ligand-Protein Contacts in PDB entry:
7KM1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 7KM1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
KPI
A
166 14 AMINO]HEXANOIC ACID
lig 2
KPI
B
166 14 AMINO]HEXANOIC ACID
lig 3
KPI
C
166 14 AMINO]HEXANOIC ACID
lig 4
KPI
D
166 14 AMINO]HEXANOIC ACID
lig 5
KPI
E
166 14 AMINO]HEXANOIC ACID
lig 6
KPI
F
166 14 AMINO]HEXANOIC ACID
lig 7
PG4
A
301 13TETRAETHYLENE GLYCOL
lig 8
PG4
A
302 13TETRAETHYLENE GLYCOL
lig 9
3VN
A
303 22 ACID
lig 10
EDO
A
304 41,2-ETHANEDIOL
lig 11
EDO
A
305 41,2-ETHANEDIOL
lig 12
PEG
A
306 7DI(HYDROXYETHYL)ETHER
lig 13
PEG
A
307 7DI(HYDROXYETHYL)ETHER
lig 14
PEG
A
308 7DI(HYDROXYETHYL)ETHER
lig 15
MG
A
309 1MAGNESIUM ION
lig 16
MG
A
310 1MAGNESIUM ION
lig 17
ACT
A
311 4ACETATE ION
lig 18
ACT
A
312 4ACETATE ION
lig 19
PGE
B
301 10TRIETHYLENE GLYCOL
lig 20
EDO
B
302 41,2-ETHANEDIOL
lig 21
EDO
B
303 41,2-ETHANEDIOL
lig 22
EDO
B
304 41,2-ETHANEDIOL
lig 23
EDO
B
305 41,2-ETHANEDIOL
lig 24
EDO
B
306 41,2-ETHANEDIOL
lig 25
EDO
B
307 41,2-ETHANEDIOL
lig 26
MG
B
308 1MAGNESIUM ION
lig 27
MG
B
309 1MAGNESIUM ION
lig 28
ACT
B
310 4ACETATE ION
lig 29
PG4
C
301 13TETRAETHYLENE GLYCOL
lig 30
3VN
C
302 22 ACID
lig 31
PGE
C
303 10TRIETHYLENE GLYCOL
lig 32
PGE
C
304 10TRIETHYLENE GLYCOL
lig 33
EDO
C
305 41,2-ETHANEDIOL
lig 34
EDO
C
306 41,2-ETHANEDIOL
lig 35
EDO
C
307 41,2-ETHANEDIOL
lig 36
PEG
C
308 7DI(HYDROXYETHYL)ETHER
lig 37
MG
C
309 1MAGNESIUM ION
lig 38
ACT
C
310 4ACETATE ION
lig 39
PGE
D
301 10TRIETHYLENE GLYCOL
lig 40
EDO
D
302 41,2-ETHANEDIOL
lig 41
EDO
D
303 41,2-ETHANEDIOL
lig 42
PEG
D
304 7DI(HYDROXYETHYL)ETHER
lig 43
MG
D
305 1MAGNESIUM ION
lig 44
MG
D
306 1MAGNESIUM ION
lig 45
ACT
D
307 4ACETATE ION
lig 46
PG4
E
301 13TETRAETHYLENE GLYCOL
lig 47
PGE
E
302 10TRIETHYLENE GLYCOL
lig 48
EDO
E
303 41,2-ETHANEDIOL
lig 49
EDO
E
304 41,2-ETHANEDIOL
lig 50
EDO
E
305 41,2-ETHANEDIOL
lig 51
PEG
E
306 7DI(HYDROXYETHYL)ETHER
lig 52
ACT
E
307 4ACETATE ION
lig 53
ACT
E
308 4ACETATE ION
lig 54
GOL
E
309 6GLYCEROL
lig 55
PG4
F
301 13TETRAETHYLENE GLYCOL
lig 56
3VN
F
302 22 ACID
lig 57
EDO
F
303 41,2-ETHANEDIOL
lig 58
EDO
F
304 41,2-ETHANEDIOL
lig 59
ACT
F
305 4ACETATE ION
lig 60
ACT
F
306 4ACETATE ION
lig 61
GOL
F
307 6GLYCEROL