Analysis of Ligand-Protein Contacts in PDB entry:
7LDD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 58 ligands in PDB entry 7LDD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
ZK1
A
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 14
R16
A
902 13HEXADECANE
lig 15
OCT
A
903 8N-OCTANE
lig 16
HP6
A
904 7HEPTANE
lig 17
D10
A
905 10DECANE
lig 18
NAG
A
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
HP6
A
908 7HEPTANE
lig 21
ZK1
B
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 22
NAG
B
902 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
D12
B
903 12DODECANE
lig 24
C14
B
904 14TETRADECANE
lig 25
DD9
B
905 8NONANE
lig 26
OCT
B
906 8N-OCTANE
lig 27
DD9
B
907 9NONANE
lig 28
ZK1
C
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 29
R16
C
902 13HEXADECANE
lig 30
OCT
C
903 8N-OCTANE
lig 31
HP6
C
904 7HEPTANE
lig 32
D10
C
905 10DECANE
lig 33
NAG
C
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
C
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
HP6
C
908 7HEPTANE
lig 36
D12
D
901 12DODECANE
lig 37
C14
D
902 14TETRADECANE
lig 38
DD9
D
903 8NONANE
lig 39
OCT
D
904 8N-OCTANE
lig 40
DD9
D
905 9NONANE
lig 41
ZK1
D
906 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 42
NAG
D
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
D10
E
201 7DECANE
lig 44
C14
E
202 14TETRADECANE
lig 45
D10
F
201 7DECANE
lig 46
C14
F
202 14TETRADECANE
lig 47
D10
G
501 10DECANE
lig 48
D12
G
502 12DODECANE
lig 49
D12
G
503 12DODECANE
lig 50
XVD
G
504 22 BENZIMIDAZOL-2-OL
lig 51
OCT
G
505 8N-OCTANE
lig 52
C14
G
506 13TETRADECANE
lig 53
D12
H
501 12DODECANE
lig 54
D12
H
502 12DODECANE
lig 55
D10
H
503 10DECANE
lig 56
XVD
H
504 22 BENZIMIDAZOL-2-OL
lig 57
OCT
H
505 8N-OCTANE
lig 58
C14
H
506 13TETRADECANE