Analysis of Ligand-Protein Contacts in PDB entry:
7LDE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 57 ligands in PDB entry 7LDE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
ZK1
A
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 12
R16
A
902 13HEXADECANE
lig 13
OCT
A
903 8N-OCTANE
lig 14
HP6
A
904 7HEPTANE
lig 15
D10
A
905 10DECANE
lig 16
NAG
A
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
HP6
A
908 7HEPTANE
lig 19
ZK1
B
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 20
NAG
B
902 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
D12
B
903 12DODECANE
lig 22
C14
B
904 14TETRADECANE
lig 23
DD9
B
905 8NONANE
lig 24
OCT
B
906 8N-OCTANE
lig 25
DD9
B
907 9NONANE
lig 26
ZK1
C
901 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 27
R16
C
902 13HEXADECANE
lig 28
OCT
C
903 8N-OCTANE
lig 29
HP6
C
904 7HEPTANE
lig 30
D10
C
905 10DECANE
lig 31
NAG
C
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
C
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
C
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
HP6
C
909 7HEPTANE
lig 35
D12
D
901 12DODECANE
lig 36
C14
D
902 14TETRADECANE
lig 37
DD9
D
903 8NONANE
lig 38
OCT
D
904 8N-OCTANE
lig 39
DD9
D
905 9NONANE
lig 40
ZK1
D
906 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 41
NAG
D
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
D10
E
201 7DECANE
lig 43
C14
E
202 14TETRADECANE
lig 44
D10
F
201 7DECANE
lig 45
C14
F
202 14TETRADECANE
lig 46
D10
G
501 10DECANE
lig 47
D12
G
502 12DODECANE
lig 48
D12
G
503 12DODECANE
lig 49
XVD
G
504 22 BENZIMIDAZOL-2-OL
lig 50
OCT
G
505 8N-OCTANE
lig 51
C14
G
506 13TETRADECANE
lig 52
D12
H
501 12DODECANE
lig 53
D12
H
502 12DODECANE
lig 54
D10
H
503 10DECANE
lig 55
XVD
H
504 22 BENZIMIDAZOL-2-OL
lig 56
OCT
H
505 8N-OCTANE
lig 57
C14
H
506 13TETRADECANE