Analysis of Ligand-Protein Contacts in PDB entry:
7M0D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 7M0D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DUP
A
701 282'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHO
lig 2
NA
A
702 1SODIUM ION
lig 3
MG
A
703 1MAGNESIUM ION
lig 4
NA
A
704 1SODIUM ION
lig 5
K
A
705 1POTASSIUM ION
lig 6
K
A
706 1POTASSIUM ION
lig 7
K
A
707 1POTASSIUM ION
lig 8
TRS
A
708 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 9
TRS
A
709 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 10
CIT
A
710 13CITRIC ACID
lig 11
EDO
A
711 41,2-ETHANEDIOL
lig 12
EDO
A
712 41,2-ETHANEDIOL
lig 13
EDO
A
713 41,2-ETHANEDIOL
lig 14
EDO
A
714 41,2-ETHANEDIOL
lig 15
EDO
F
101 41,2-ETHANEDIOL
lig 16
DUP
B
701 282'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHO
lig 17
NA
B
702 1SODIUM ION
lig 18
MG
B
703 1MAGNESIUM ION
lig 19
NA
B
704 1SODIUM ION
lig 20
K
B
705 1POTASSIUM ION
lig 21
K
B
706 1POTASSIUM ION
lig 22
K
B
707 1POTASSIUM ION
lig 23
CL
B
708 1CHLORIDE ION
lig 24
TRS
B
709 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 25
CIT
B
710 13CITRIC ACID
lig 26
EDO
B
711 41,2-ETHANEDIOL
lig 27
EDO
B
712 41,2-ETHANEDIOL
lig 28
FMT
B
713 3FORMIC ACID
lig 29
FMT
B
714 3FORMIC ACID
lig 30
NA
K
101 1SODIUM ION
lig 31
TRS
J
101 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 32
EDO
J
102 41,2-ETHANEDIOL