Analysis of Ligand-Protein Contacts in PDB entry:
7MDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 7MDI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CDP
A
801 25CYTIDINE-5'-DIPHOSPHATE
lig 2
DTP
A
802 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 3
MG
A
803 1MAGNESIUM ION
lig 4
DTP
A
804 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 5
MG
A
805 1MAGNESIUM ION
lig 6
FEO
E
501 3MU-OXO-DIIRON
lig 7
CDP
B
801 25CYTIDINE-5'-DIPHOSPHATE
lig 8
DTP
B
802 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 9
MG
B
803 1MAGNESIUM ION
lig 10
DTP
B
804 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 11
MG
B
805 1MAGNESIUM ION
lig 12
FEO
G
501 3MU-OXO-DIIRON
lig 13
CDP
D
801 25CYTIDINE-5'-DIPHOSPHATE
lig 14
DTP
D
802 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 15
MG
D
803 1MAGNESIUM ION
lig 16
DTP
D
804 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 17
MG
D
805 1MAGNESIUM ION
lig 18
FEO
F
501 3MU-OXO-DIIRON
lig 19
CDP
C
801 25CYTIDINE-5'-DIPHOSPHATE
lig 20
DTP
C
802 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 21
MG
C
803 1MAGNESIUM ION
lig 22
DTP
C
804 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 23
MG
C
805 1MAGNESIUM ION
lig 24
FEO
H
501 3MU-OXO-DIIRON