Analysis of Ligand-Protein Contacts in PDB entry:
7NDP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 7NDP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
GOL
A
302 6GLYCEROL
lig 5
GOL
A
303 6GLYCEROL
lig 6
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
U8T
B
302 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 8
U8T
C
301 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 9
GOL
D
301 6GLYCEROL
lig 10
GOL
D
302 6GLYCEROL
lig 11
U8T
D
303 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 12
GOL
E
401 6GLYCEROL
lig 13
U8T
E
402 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 14
NAG
F
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
G
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
U8T
G
302 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 17
SO4
G
303 5SULFATE ION
lig 18
NAG
H
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
U8T
H
302 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 20
U8T
I
301 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 21
CL
I
302 1CHLORIDE ION
lig 22
NAG
J
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
U8T
J
302 176-BROMANYLSPIRO[3~{H}-CHROMENE-2,4'-PIPERI
lig 24
CL
J
303 1CHLORIDE ION