Analysis of Ligand-Protein Contacts in PDB entry:
7OPM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 7OPM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
185 11PHOSPHOTHREONINE
lig 2
PTR
A
187 16O-PHOSPHOTYROSINE
lig 3
ABU
B
6 6GAMMA-AMINO-BUTANOIC ACID
lig 4
08G
A
401 23 [(1S)-1-PHENYLETHYL]UREA
lig 5
GOL
A
402 6GLYCEROL
lig 6
GOL
A
403 6GLYCEROL
lig 7
GOL
A
404 6GLYCEROL