Analysis of Ligand-Protein Contacts in PDB entry:
7P7F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 35 ligands in PDB entry 7P7F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
220 11PHOSPHOTHREONINE
lig 2
TPO
B
220 11PHOSPHOTHREONINE
lig 3
TPO
C
220 11PHOSPHOTHREONINE
lig 4
TPO
D
220 11PHOSPHOTHREONINE
lig 5
SO4
A
301 5SULFATE ION
lig 6
SO4
A
302 5SULFATE ION
lig 7
SO4
A
303 5SULFATE ION
lig 8
EDO
A
304 41,2-ETHANEDIOL
lig 9
AMP
A
305 23ADENOSINE MONOPHOSPHATE
lig 10
SO4
B
301 5SULFATE ION
lig 11
SO4
B
302 5SULFATE ION
lig 12
SO4
B
303 5SULFATE ION
lig 13
EDO
B
304 41,2-ETHANEDIOL
lig 14
EDO
B
305 41,2-ETHANEDIOL
lig 15
EDO
B
306 41,2-ETHANEDIOL
lig 16
EDO
B
307 41,2-ETHANEDIOL
lig 17
EDO
B
308 41,2-ETHANEDIOL
lig 18
EDO
B
309 41,2-ETHANEDIOL
lig 19
AMP
B
310 23ADENOSINE MONOPHOSPHATE
lig 20
SO4
C
301 5SULFATE ION
lig 21
SO4
C
302 5SULFATE ION
lig 22
SO4
C
303 5SULFATE ION
lig 23
EDO
C
304 41,2-ETHANEDIOL
lig 24
EDO
C
305 41,2-ETHANEDIOL
lig 25
EDO
C
306 41,2-ETHANEDIOL
lig 26
ADN
C
307 19ADENOSINE
lig 27
SO4
D
301 5SULFATE ION
lig 28
SO4
D
302 5SULFATE ION
lig 29
EDO
D
303 41,2-ETHANEDIOL
lig 30
EDO
D
304 41,2-ETHANEDIOL
lig 31
EDO
D
305 41,2-ETHANEDIOL
lig 32
EDO
D
306 41,2-ETHANEDIOL
lig 33
EDO
D
307 41,2-ETHANEDIOL
lig 34
EDO
D
308 41,2-ETHANEDIOL
lig 35
ADN
D
309 19ADENOSINE