Analysis of Ligand-Protein Contacts in PDB entry:
7PDZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 7PDZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HIC
I
73 114-METHYL-HISTIDINE
lig 2
HIC
J
73 114-METHYL-HISTIDINE
lig 3
HIC
K
73 114-METHYL-HISTIDINE
lig 4
HIC
L
73 114-METHYL-HISTIDINE
lig 5
HIC
N
73 114-METHYL-HISTIDINE
lig 6
HIC
O
73 114-METHYL-HISTIDINE
lig 7
HYP
Q
1 84-HYDROXYPROLINE
lig 8
EEP
Q
4 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 9
DTH
Q
6 7D-THREONINE
lig 10
HYP
R
1 84-HYDROXYPROLINE
lig 11
EEP
R
4 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 12
DTH
R
6 7D-THREONINE
lig 13
HYP
S
1 84-HYDROXYPROLINE
lig 14
EEP
S
4 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 15
DTH
S
6 7D-THREONINE
lig 16
HYP
T
1 84-HYDROXYPROLINE
lig 17
EEP
T
4 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 18
DTH
T
6 7D-THREONINE
lig 19
HYP
P
1 84-HYDROXYPROLINE
lig 20
EEP
P
4 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 21
DTH
P
6 7D-THREONINE
lig 22
ADP
I
401 27ADENOSINE-5'-DIPHOSPHATE
lig 23
MG
I
402 1MAGNESIUM ION
lig 24
ADP
J
401 27ADENOSINE-5'-DIPHOSPHATE
lig 25
MG
J
402 1MAGNESIUM ION
lig 26
PO4
K
401 5PHOSPHATE ION
lig 27
ADP
K
402 27ADENOSINE-5'-DIPHOSPHATE
lig 28
MG
K
403 1MAGNESIUM ION
lig 29
ADP
L
401 27ADENOSINE-5'-DIPHOSPHATE
lig 30
MG
L
402 1MAGNESIUM ION
lig 31
PO4
L
403 5PHOSPHATE ION
lig 32
ADP
N
401 27ADENOSINE-5'-DIPHOSPHATE
lig 33
MG
N
402 1MAGNESIUM ION
lig 34
PO4
N
403 5PHOSPHATE ION
lig 35
ADP
O
401 27ADENOSINE-5'-DIPHOSPHATE
lig 36
MG
O
402 1MAGNESIUM ION
lig 37
PO4
O
403 5PHOSPHATE ION