Analysis of Ligand-Protein Contacts in PDB entry:
7PKI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 7PKI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
SO4
A
705 5SULFATE ION
lig 8
SO4
A
706 5SULFATE ION
lig 9
SO4
A
707 5SULFATE ION
lig 10
TRS
A
708 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 11
PEG
A
709 7DI(HYDROXYETHYL)ETHER
lig 12
PEG
A
710 7DI(HYDROXYETHYL)ETHER
lig 13
ZN
A
711 1ZINC ION
lig 14
NAG
E
1701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
E
1702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
SO4
E
1703 5SULFATE ION
lig 17
CL
E
1704 1CHLORIDE ION
lig 18
CL
E
1705 1CHLORIDE ION
lig 19
PEG
E
1706 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
E
1707 7DI(HYDROXYETHYL)ETHER
lig 21
PEG
E
1708 7DI(HYDROXYETHYL)ETHER
lig 22
GOL
E
1709 6GLYCEROL