Analysis of Ligand-Protein Contacts in PDB entry:
7QDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 264 ligands in PDB entry 7QDI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DGL
A
2 9D-GLUTAMIC ACID
lig 2
DLE
A
3 8D-LEUCINE
lig 3
AIB
A
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 4
AIB
A
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 5
DLE
A
6 8D-LEUCINE
lig 6
DLY
A
7 9D-LYSINE
lig 7
DGL
A
8 9D-GLUTAMIC ACID
lig 8
DLE
A
9 8D-LEUCINE
lig 9
AIB
A
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 10
AIB
A
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 11
DLE
A
12 8D-LEUCINE
lig 12
DLY
A
13 9D-LYSINE
lig 13
DGL
A
14 9D-GLUTAMIC ACID
lig 14
DLE
A
15 8D-LEUCINE
lig 15
AIB
A
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 16
AIB
A
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 17
DLE
A
18 8D-LEUCINE
lig 18
DLY
A
19 9D-LYSINE
lig 19
DGL
A
20 9D-GLUTAMIC ACID
lig 20
DLE
A
21 8D-LEUCINE
lig 21
AIB
A
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 22
AIB
A
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 23
DLE
A
24 8D-LEUCINE
lig 24
DLY
A
25 9D-LYSINE
lig 25
AIB
A
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 26
AIB
A
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 27
AIB
A
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 28
BF7
A
29 124-BROMO-D-PHENYLALANINE
lig 29
DLY
A
30 9D-LYSINE
lig 30
DGL
B
2 9D-GLUTAMIC ACID
lig 31
DLE
B
3 8D-LEUCINE
lig 32
AIB
B
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 33
AIB
B
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 34
DLE
B
6 8D-LEUCINE
lig 35
DLY
B
7 9D-LYSINE
lig 36
DGL
B
8 9D-GLUTAMIC ACID
lig 37
DLE
B
9 8D-LEUCINE
lig 38
AIB
B
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 39
AIB
B
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 40
DLE
B
12 8D-LEUCINE
lig 41
DLY
B
13 9D-LYSINE
lig 42
DGL
B
14 9D-GLUTAMIC ACID
lig 43
DLE
B
15 8D-LEUCINE
lig 44
AIB
B
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 45
AIB
B
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 46
DLE
B
18 8D-LEUCINE
lig 47
DLY
B
19 9D-LYSINE
lig 48
DGL
B
20 9D-GLUTAMIC ACID
lig 49
DLE
B
21 8D-LEUCINE
lig 50
AIB
B
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 51
AIB
B
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 52
DLE
B
24 8D-LEUCINE
lig 53
DLY
B
25 9D-LYSINE
lig 54
AIB
B
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 55
AIB
B
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 56
AIB
B
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 57
BF7
B
29 124-BROMO-D-PHENYLALANINE
lig 58
DLY
B
30 9D-LYSINE
lig 59
DGL
C
2 9D-GLUTAMIC ACID
lig 60
DLE
C
3 8D-LEUCINE
lig 61
AIB
C
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 62
AIB
C
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 63
DLE
C
6 8D-LEUCINE
lig 64
DLY
C
7 9D-LYSINE
lig 65
DGL
C
8 9D-GLUTAMIC ACID
lig 66
DLE
C
9 8D-LEUCINE
lig 67
AIB
C
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 68
AIB
C
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 69
DLE
C
12 8D-LEUCINE
lig 70
DLY
C
13 9D-LYSINE
lig 71
DGL
C
14 9D-GLUTAMIC ACID
lig 72
DLE
C
15 8D-LEUCINE
lig 73
AIB
C
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 74
AIB
C
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 75
DLE
C
18 8D-LEUCINE
lig 76
DLY
C
19 9D-LYSINE
lig 77
DGL
C
20 9D-GLUTAMIC ACID
lig 78
DLE
C
21 8D-LEUCINE
lig 79
AIB
C
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 80
AIB
C
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 81
DLE
C
24 8D-LEUCINE
lig 82
DLY
C
25 9D-LYSINE
lig 83
AIB
C
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 84
AIB
C
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 85
AIB
C
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 86
BF7
C
29 124-BROMO-D-PHENYLALANINE
lig 87
DLY
C
30 9D-LYSINE
lig 88
DGL
D
2 9D-GLUTAMIC ACID
lig 89
DLE
D
3 8D-LEUCINE
lig 90
AIB
D
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 91
AIB
D
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 92
DLE
D
6 8D-LEUCINE
lig 93
DLY
D
7 9D-LYSINE
lig 94
DGL
D
8 9D-GLUTAMIC ACID
lig 95
DLE
D
9 8D-LEUCINE
lig 96
AIB
D
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 97
AIB
D
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 98
DLE
D
12 8D-LEUCINE
lig 99
DLY
D
13 9D-LYSINE
lig 100
DGL
D
14 9D-GLUTAMIC ACID
lig 101
DLE
D
15 8D-LEUCINE
lig 102
AIB
D
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 103
AIB
D
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 104
DLE
D
18 8D-LEUCINE
lig 105
DLY
D
19 9D-LYSINE
lig 106
DGL
D
20 9D-GLUTAMIC ACID
lig 107
DLE
D
21 8D-LEUCINE
lig 108
AIB
D
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 109
AIB
D
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 110
DLE
D
24 8D-LEUCINE
lig 111
DLY
D
25 9D-LYSINE
lig 112
AIB
D
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 113
AIB
D
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 114
AIB
D
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 115
BF7
D
29 124-BROMO-D-PHENYLALANINE
lig 116
DLY
D
30 9D-LYSINE
lig 117
DGL
E
2 9D-GLUTAMIC ACID
lig 118
DLE
E
3 8D-LEUCINE
lig 119
AIB
E
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 120
AIB
E
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 121
DLE
E
6 8D-LEUCINE
lig 122
DLY
E
7 9D-LYSINE
lig 123
DGL
E
8 9D-GLUTAMIC ACID
lig 124
DLE
E
9 8D-LEUCINE
lig 125
AIB
E
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 126
AIB
E
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 127
DLE
E
12 8D-LEUCINE
lig 128
DLY
E
13 9D-LYSINE
lig 129
DGL
E
14 9D-GLUTAMIC ACID
lig 130
DLE
E
15 8D-LEUCINE
lig 131
AIB
E
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 132
AIB
E
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 133
DLE
E
18 8D-LEUCINE
lig 134
DLY
E
19 9D-LYSINE
lig 135
DGL
E
20 9D-GLUTAMIC ACID
lig 136
DLE
E
21 8D-LEUCINE
lig 137
AIB
E
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 138
AIB
E
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 139
DLE
E
24 8D-LEUCINE
lig 140
DLY
E
25 9D-LYSINE
lig 141
AIB
E
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 142
AIB
E
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 143
AIB
E
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 144
BF7
E
29 124-BROMO-D-PHENYLALANINE
lig 145
DLY
E
30 9D-LYSINE
lig 146
DGL
F
2 9D-GLUTAMIC ACID
lig 147
DLE
F
3 8D-LEUCINE
lig 148
AIB
F
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 149
AIB
F
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 150
DLE
F
6 8D-LEUCINE
lig 151
DLY
F
7 9D-LYSINE
lig 152
DGL
F
8 9D-GLUTAMIC ACID
lig 153
DLE
F
9 8D-LEUCINE
lig 154
AIB
F
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 155
AIB
F
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 156
DLE
F
12 8D-LEUCINE
lig 157
DLY
F
13 9D-LYSINE
lig 158
DGL
F
14 9D-GLUTAMIC ACID
lig 159
DLE
F
15 8D-LEUCINE
lig 160
AIB
F
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 161
AIB
F
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 162
DLE
F
18 8D-LEUCINE
lig 163
DLY
F
19 9D-LYSINE
lig 164
DGL
F
20 9D-GLUTAMIC ACID
lig 165
DLE
F
21 8D-LEUCINE
lig 166
AIB
F
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 167
AIB
F
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 168
DLE
F
24 8D-LEUCINE
lig 169
DLY
F
25 9D-LYSINE
lig 170
AIB
F
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 171
AIB
F
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 172
AIB
F
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 173
BF7
F
29 124-BROMO-D-PHENYLALANINE
lig 174
DLY
F
30 9D-LYSINE
lig 175
DGL
G
2 9D-GLUTAMIC ACID
lig 176
DLE
G
3 8D-LEUCINE
lig 177
AIB
G
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 178
AIB
G
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 179
DLE
G
6 8D-LEUCINE
lig 180
DLY
G
7 9D-LYSINE
lig 181
DGL
G
8 9D-GLUTAMIC ACID
lig 182
DLE
G
9 8D-LEUCINE
lig 183
AIB
G
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 184
AIB
G
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 185
DLE
G
12 8D-LEUCINE
lig 186
DLY
G
13 9D-LYSINE
lig 187
DGL
G
14 9D-GLUTAMIC ACID
lig 188
DLE
G
15 8D-LEUCINE
lig 189
AIB
G
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 190
AIB
G
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 191
DLE
G
18 8D-LEUCINE
lig 192
DLY
G
19 9D-LYSINE
lig 193
DGL
G
20 9D-GLUTAMIC ACID
lig 194
DLE
G
21 8D-LEUCINE
lig 195
AIB
G
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 196
AIB
G
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 197
DLE
G
24 8D-LEUCINE
lig 198
DLY
G
25 9D-LYSINE
lig 199
AIB
G
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 200
AIB
G
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 201
AIB
G
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 202
BF7
G
29 124-BROMO-D-PHENYLALANINE
lig 203
DLY
G
30 9D-LYSINE
lig 204
DGL
H
2 9D-GLUTAMIC ACID
lig 205
DLE
H
3 8D-LEUCINE
lig 206
AIB
H
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 207
AIB
H
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 208
DLE
H
6 8D-LEUCINE
lig 209
DLY
H
7 9D-LYSINE
lig 210
DGL
H
8 9D-GLUTAMIC ACID
lig 211
DLE
H
9 8D-LEUCINE
lig 212
AIB
H
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 213
AIB
H
11 6ALPHA-AMINOISOBUTYRIC ACID
lig 214
DLE
H
12 8D-LEUCINE
lig 215
DLY
H
13 9D-LYSINE
lig 216
DGL
H
14 9D-GLUTAMIC ACID
lig 217
DLE
H
15 8D-LEUCINE
lig 218
AIB
H
16 6ALPHA-AMINOISOBUTYRIC ACID
lig 219
AIB
H
17 6ALPHA-AMINOISOBUTYRIC ACID
lig 220
DLE
H
18 8D-LEUCINE
lig 221
DLY
H
19 9D-LYSINE
lig 222
DGL
H
20 9D-GLUTAMIC ACID
lig 223
DLE
H
21 8D-LEUCINE
lig 224
AIB
H
22 6ALPHA-AMINOISOBUTYRIC ACID
lig 225
AIB
H
23 6ALPHA-AMINOISOBUTYRIC ACID
lig 226
DLE
H
24 8D-LEUCINE
lig 227
DLY
H
25 9D-LYSINE
lig 228
AIB
H
26 6ALPHA-AMINOISOBUTYRIC ACID
lig 229
AIB
H
27 6ALPHA-AMINOISOBUTYRIC ACID
lig 230
AIB
H
28 6ALPHA-AMINOISOBUTYRIC ACID
lig 231
BF7
H
29 124-BROMO-D-PHENYLALANINE
lig 232
DLY
H
30 9D-LYSINE
lig 233
PGE
A
101 10TRIETHYLENE GLYCOL
lig 234
PGE
A
102 10TRIETHYLENE GLYCOL
lig 235
EDO
A
103 41,2-ETHANEDIOL
lig 236
SO4
A
104 5SULFATE ION
lig 237
PEG
A
105 7DI(HYDROXYETHYL)ETHER
lig 238
PEG
A
106 7DI(HYDROXYETHYL)ETHER
lig 239
EDO
A
107 41,2-ETHANEDIOL
lig 240
PG0
B
101 82-(2-METHOXYETHOXY)ETHANOL
lig 241
EDO
B
102 41,2-ETHANEDIOL
lig 242
PEG
B
103 7DI(HYDROXYETHYL)ETHER
lig 243
EDO
B
104 41,2-ETHANEDIOL
lig 244
EDO
C
101 41,2-ETHANEDIOL
lig 245
PG6
C
102 18 ETHOXY}-ETHANE
lig 246
SO4
C
103 5SULFATE ION
lig 247
BO3
C
104 4BORIC ACID
lig 248
EDO
C
105 41,2-ETHANEDIOL
lig 249
EDO
D
101 41,2-ETHANEDIOL
lig 250
EDO
D
102 41,2-ETHANEDIOL
lig 251
EDO
D
103 41,2-ETHANEDIOL
lig 252
SO4
D
104 5SULFATE ION
lig 253
EDO
E
101 41,2-ETHANEDIOL
lig 254
PG4
E
102 13TETRAETHYLENE GLYCOL
lig 255
PEG
E
103 7DI(HYDROXYETHYL)ETHER
lig 256
EDO
E
104 41,2-ETHANEDIOL
lig 257
PEG
E
105 7DI(HYDROXYETHYL)ETHER
lig 258
PEG
E
106 7DI(HYDROXYETHYL)ETHER
lig 259
EDO
E
107 41,2-ETHANEDIOL
lig 260
BO3
E
108 4BORIC ACID
lig 261
EDO
E
109 41,2-ETHANEDIOL
lig 262
PEG
F
101 7DI(HYDROXYETHYL)ETHER
lig 263
PEG
G
101 7DI(HYDROXYETHYL)ETHER
lig 264
EDO
G
102 41,2-ETHANEDIOL