Analysis of Ligand-Protein Contacts in PDB entry:
7QDK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 7QDK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
4BF
A
29 124-BROMO-L-PHENYLALANINE
lig 3
NH2
A
31 1AMINO GROUP
lig 4
ACE
B
0 3ACETYL GROUP
lig 5
4BF
B
29 124-BROMO-L-PHENYLALANINE
lig 6
NH2
B
31 1AMINO GROUP
lig 7
ACE
C
0 3ACETYL GROUP
lig 8
4BF
C
29 124-BROMO-L-PHENYLALANINE
lig 9
NH2
C
31 1AMINO GROUP
lig 10
NA
A
101 1SODIUM ION
lig 11
MPD
A
102 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 12
NA
B
101 1SODIUM ION
lig 13
NA
B
102 1SODIUM ION
lig 14
GOL
B
103 6GLYCEROL