Analysis of Ligand-Protein Contacts in PDB entry:
7QGV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 60 ligands in PDB entry 7QGV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ZAE
A
1 12N-METHYL-D-PHENYLALANINE
lig 2
DGN
A
4 9D-GLUTAMINE
lig 3
28J
A
5 8D-ALLOISOLEUCINE
lig 4
DTH
A
8 7D-THREONINE
lig 5
EI4
A
10 11ENDURACIDIDINE
lig 6
ZAE
B
1 12N-METHYL-D-PHENYLALANINE
lig 7
DGN
B
4 9D-GLUTAMINE
lig 8
28J
B
5 8D-ALLOISOLEUCINE
lig 9
DTH
B
8 7D-THREONINE
lig 10
EI4
B
10 11ENDURACIDIDINE
lig 11
ZAE
C
1 12N-METHYL-D-PHENYLALANINE
lig 12
DGN
C
4 9D-GLUTAMINE
lig 13
28J
C
5 8D-ALLOISOLEUCINE
lig 14
DTH
C
8 7D-THREONINE
lig 15
EI4
C
10 11ENDURACIDIDINE
lig 16
ZAE
D
1 12N-METHYL-D-PHENYLALANINE
lig 17
DGN
D
4 9D-GLUTAMINE
lig 18
28J
D
5 8D-ALLOISOLEUCINE
lig 19
DTH
D
8 7D-THREONINE
lig 20
EI4
D
10 11ENDURACIDIDINE
lig 21
DGL
E
2 8D-GLUTAMIC ACID
lig 22
DAL
E
4 5D-ALANINE
lig 23
DAL
E
5 6D-ALANINE
lig 24
DGL
F
2 8D-GLUTAMIC ACID
lig 25
DAL
F
4 5D-ALANINE
lig 26
DAL
F
5 6D-ALANINE
lig 27
DGL
G
2 8D-GLUTAMIC ACID
lig 28
DAL
G
4 5D-ALANINE
lig 29
DAL
G
5 6D-ALANINE
lig 30
DGL
H
2 8D-GLUTAMIC ACID
lig 31
DAL
H
4 5D-ALANINE
lig 32
DAL
H
5 6D-ALANINE
lig 33
MUB
I
1 19N-ACETYL-ALPHA-MURAMIC ACID
lig 34
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
MUB
J
1 19N-ACETYL-ALPHA-MURAMIC ACID
lig 36
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
MUB
K
1 19N-ACETYL-ALPHA-MURAMIC ACID
lig 38
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
MUB
L
1 19N-ACETYL-ALPHA-MURAMIC ACID
lig 40
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
2PO
A
101 4PHOSPHONATE
lig 42
2PO
A
102 4PHOSPHONATE
lig 43
P1W
A
103 53-METHYLBUT-2-EN-1-OL
lig 44
P1W
A
104 53-METHYLBUT-2-EN-1-OL
lig 45
P1W
A
105 53-METHYLBUT-2-EN-1-OL
lig 46
P1W
B
101 53-METHYLBUT-2-EN-1-OL
lig 47
2PO
B
102 4PHOSPHONATE
lig 48
2PO
B
103 4PHOSPHONATE
lig 49
P1W
B
104 53-METHYLBUT-2-EN-1-OL
lig 50
P1W
B
105 53-METHYLBUT-2-EN-1-OL
lig 51
P1W
C
101 53-METHYLBUT-2-EN-1-OL
lig 52
P1W
C
102 53-METHYLBUT-2-EN-1-OL
lig 53
P1W
C
103 53-METHYLBUT-2-EN-1-OL
lig 54
2PO
C
104 4PHOSPHONATE
lig 55
2PO
C
105 4PHOSPHONATE
lig 56
P1W
C
106 53-METHYLBUT-2-EN-1-OL
lig 57
2PO
D
101 4PHOSPHONATE
lig 58
2PO
D
102 4PHOSPHONATE
lig 59
P1W
D
103 53-METHYLBUT-2-EN-1-OL
lig 60
P1W
D
104 53-METHYLBUT-2-EN-1-OL