Analysis of Ligand-Protein Contacts in PDB entry:
7QSK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 71 ligands in PDB entry 7QSK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AME
d
1 11N-ACETYLMETHIONINE
lig 11
SAC
i
1 9N-ACETYL-SERINE
lig 12
AYA
r
1 8N-ACETYLALANINE
lig 13
3PE
A
201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
PC1
A
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
PC1
A
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
PC1
A
204 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
SF4
B
201 8IRON/SULFUR CLUSTER
lig 18
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
U10
D
701 63UBIQUINONE-10
lig 20
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 21
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 22
SF4
F
502 8IRON/SULFUR CLUSTER
lig 23
SF4
G
801 8IRON/SULFUR CLUSTER
lig 24
SF4
G
802 8IRON/SULFUR CLUSTER
lig 25
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 26
K
G
804 1POTASSIUM ION
lig 27
3PE
H
601 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
CDL
H
602 51CARDIOLIPIN
lig 29
PC1
I
201 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
SF4
I
202 8IRON/SULFUR CLUSTER
lig 31
SF4
I
203 8IRON/SULFUR CLUSTER
lig 32
PC1
I
204 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
L
701 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
CDL
L
702 76CARDIOLIPIN
lig 36
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
L
704 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
M
901 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
3PE
M
902 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 40
3PE
M
903 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
PC1
M
904 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
3PE
N
401 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
CDL
N
402 62CARDIOLIPIN
lig 44
GTP
O
401 32GUANOSINE-5'-TRIPHOSPHATE
lig 45
MG
O
402 1MAGNESIUM ION
lig 46
NDP
P
501 48 PHOSPHATE
lig 47
3PE
P
502 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
ZN
R
201 1ZINC ION
lig 49
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 50
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 51
CDL
X
201 86CARDIOLIPIN
lig 52
3PE
Y
801 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
3PE
Y
802 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
3PE
Y
803 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 55
3PE
Y
804 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
3PE
Y
805 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
PC1
Y
806 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 58
PC1
Z
201 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 60
PC1
d
202 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 61
CDL
d
203 65CARDIOLIPIN
lig 62
PC1
g
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 63
CDL
h
201 80CARDIOLIPIN
lig 64
PC1
h
202 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 65
CHD
i
201 29CHOLIC ACID
lig 66
3PE
m
401 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
m
402 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
MYR
o
201 15MYRISTIC ACID
lig 69
PC1
q
201 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 70
PC1
q
202 491,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 71
CDL
r
201 61CARDIOLIPIN