Analysis of Ligand-Protein Contacts in PDB entry:
7R45


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 7R45. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
SAC
i
1 9N-ACETYL-SERINE
lig 11
AYA
r
1 8N-ACETYLALANINE
lig 12
LMT
A
301 35DODECYL-BETA-D-MALTOSIDE
lig 13
3PE
A
302 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
SF4
B
201 8IRON/SULFUR CLUSTER
lig 15
LMT
B
202 35DODECYL-BETA-D-MALTOSIDE
lig 16
PC1
B
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 18
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 19
SF4
F
502 8IRON/SULFUR CLUSTER
lig 20
SF4
G
801 8IRON/SULFUR CLUSTER
lig 21
SF4
G
802 8IRON/SULFUR CLUSTER
lig 22
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 23
K
G
804 1POTASSIUM ION
lig 24
3PE
H
601 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
I49
H
602 17 ETHYL]GUANIDINE
lig 26
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
SF4
I
202 8IRON/SULFUR CLUSTER
lig 28
SF4
I
203 8IRON/SULFUR CLUSTER
lig 29
3PE
J
401 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
LMT
J
402 35DODECYL-BETA-D-MALTOSIDE
lig 31
CDL
K
401 67CARDIOLIPIN
lig 32
3PE
L
701 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
LMT
L
702 35DODECYL-BETA-D-MALTOSIDE
lig 34
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
CDL
L
704 100CARDIOLIPIN
lig 36
LMT
L
705 35DODECYL-BETA-D-MALTOSIDE
lig 37
LMT
L
706 35DODECYL-BETA-D-MALTOSIDE
lig 38
3PE
M
601 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
LMT
M
602 35DODECYL-BETA-D-MALTOSIDE
lig 40
3PE
M
603 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
PC1
M
604 411,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
LMT
M
605 35DODECYL-BETA-D-MALTOSIDE
lig 43
LMT
M
606 35DODECYL-BETA-D-MALTOSIDE
lig 44
LMT
N
501 35DODECYL-BETA-D-MALTOSIDE
lig 45
3PE
N
502 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
I49
N
503 17 ETHYL]GUANIDINE
lig 47
3PE
O
1201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
GTP
O
1202 32GUANOSINE-5'-TRIPHOSPHATE
lig 49
MG
O
1203 1MAGNESIUM ION
lig 50
NDP
P
501 48 PHOSPHATE
lig 51
ZN
R
201 1ZINC ION
lig 52
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 53
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 54
CDL
X
1701 65CARDIOLIPIN
lig 55
3PE
Y
401 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
3PE
b
901 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
CDL
d
201 65CARDIOLIPIN
lig 58
LMT
f
1901 35DODECYL-BETA-D-MALTOSIDE
lig 59
CDL
h
1001 67CARDIOLIPIN
lig 60
LMT
h
1002 35DODECYL-BETA-D-MALTOSIDE
lig 61
LMT
l
201 35DODECYL-BETA-D-MALTOSIDE
lig 62
MYR
o
201 15MYRISTIC ACID
lig 63
CDL
q
201 76CARDIOLIPIN