Analysis of Ligand-Protein Contacts in PDB entry:
7R47


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 7R47. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
SAC
i
1 9N-ACETYL-SERINE
lig 11
AYA
r
1 8N-ACETYLALANINE
lig 12
LMT
A
301 35DODECYL-BETA-D-MALTOSIDE
lig 13
3PE
A
302 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
SF4
B
201 8IRON/SULFUR CLUSTER
lig 15
LMT
B
202 35DODECYL-BETA-D-MALTOSIDE
lig 16
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 17
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 18
SF4
F
502 8IRON/SULFUR CLUSTER
lig 19
SF4
G
801 8IRON/SULFUR CLUSTER
lig 20
SF4
G
802 8IRON/SULFUR CLUSTER
lig 21
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 22
K
G
804 1POTASSIUM ION
lig 23
3PE
H
601 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
I49
H
602 17 ETHYL]GUANIDINE
lig 25
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
SF4
I
202 8IRON/SULFUR CLUSTER
lig 27
SF4
I
203 8IRON/SULFUR CLUSTER
lig 28
CDL
J
401 71CARDIOLIPIN
lig 29
3PE
L
701 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
L
702 69CARDIOLIPIN
lig 31
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
LMT
L
704 35DODECYL-BETA-D-MALTOSIDE
lig 33
3PE
M
601 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
M
602 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
PC1
M
603 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
LMT
N
901 35DODECYL-BETA-D-MALTOSIDE
lig 37
LMT
N
902 35DODECYL-BETA-D-MALTOSIDE
lig 38
3PE
N
903 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
I49
N
904 17 ETHYL]GUANIDINE
lig 40
GTP
O
401 32GUANOSINE-5'-TRIPHOSPHATE
lig 41
MG
O
402 1MAGNESIUM ION
lig 42
NDP
P
501 48 PHOSPHATE
lig 43
ZN
R
201 1ZINC ION
lig 44
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 45
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 46
CDL
X
1701 72CARDIOLIPIN
lig 47
3PE
Y
401 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
LMT
Y
402 35DODECYL-BETA-D-MALTOSIDE
lig 49
3PE
b
901 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 50
3PE
d
1201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
CDL
d
1202 65CARDIOLIPIN
lig 52
LMT
d
1203 35DODECYL-BETA-D-MALTOSIDE
lig 53
LMT
e
201 35DODECYL-BETA-D-MALTOSIDE
lig 54
LMT
f
1801 35DODECYL-BETA-D-MALTOSIDE
lig 55
LMT
f
1802 35DODECYL-BETA-D-MALTOSIDE
lig 56
CDL
h
1001 67CARDIOLIPIN
lig 57
LMT
h
1002 35DODECYL-BETA-D-MALTOSIDE
lig 58
LMT
j
101 35DODECYL-BETA-D-MALTOSIDE
lig 59
LMT
l
201 35DODECYL-BETA-D-MALTOSIDE
lig 60
MYR
o
201 15MYRISTIC ACID
lig 61
PC1
q
201 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 62
CDL
q
202 76CARDIOLIPIN