Analysis of Ligand-Protein Contacts in PDB entry:
7R48


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 66 ligands in PDB entry 7R48. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
SAC
i
1 9N-ACETYL-SERINE
lig 11
AYA
r
1 8N-ACETYLALANINE
lig 12
LMT
A
301 35DODECYL-BETA-D-MALTOSIDE
lig 13
3PE
A
302 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
LMT
A
303 35DODECYL-BETA-D-MALTOSIDE
lig 15
SF4
B
201 8IRON/SULFUR CLUSTER
lig 16
LMT
B
202 35DODECYL-BETA-D-MALTOSIDE
lig 17
PC1
B
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 19
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 20
SF4
F
502 8IRON/SULFUR CLUSTER
lig 21
SF4
G
801 8IRON/SULFUR CLUSTER
lig 22
SF4
G
802 8IRON/SULFUR CLUSTER
lig 23
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 24
K
G
804 1POTASSIUM ION
lig 25
3PE
H
401 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
3PE
H
402 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
I49
H
403 17 ETHYL]GUANIDINE
lig 28
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 29
SF4
I
202 8IRON/SULFUR CLUSTER
lig 30
SF4
I
203 8IRON/SULFUR CLUSTER
lig 31
LMT
J
201 35DODECYL-BETA-D-MALTOSIDE
lig 32
CDL
J
202 71CARDIOLIPIN
lig 33
3PE
L
701 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
LMT
L
702 35DODECYL-BETA-D-MALTOSIDE
lig 35
CDL
L
703 69CARDIOLIPIN
lig 36
3PE
L
704 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
L
705 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
M
601 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
LMT
M
602 35DODECYL-BETA-D-MALTOSIDE
lig 40
LMT
M
603 35DODECYL-BETA-D-MALTOSIDE
lig 41
3PE
M
604 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
LMT
M
605 35DODECYL-BETA-D-MALTOSIDE
lig 43
LMT
N
501 35DODECYL-BETA-D-MALTOSIDE
lig 44
3PE
N
502 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
CDL
N
503 65CARDIOLIPIN
lig 46
I49
N
504 17 ETHYL]GUANIDINE
lig 47
GTP
O
401 32GUANOSINE-5'-TRIPHOSPHATE
lig 48
MG
O
402 1MAGNESIUM ION
lig 49
NDP
P
501 48 PHOSPHATE
lig 50
ZN
R
201 1ZINC ION
lig 51
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 52
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 53
3PE
Y
401 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
LMT
Y
402 35DODECYL-BETA-D-MALTOSIDE
lig 55
3PE
d
1201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
CDL
d
1202 73CARDIOLIPIN
lig 57
LMT
f
1801 35DODECYL-BETA-D-MALTOSIDE
lig 58
PC1
g
1501 491,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
CDL
h
1001 67CARDIOLIPIN
lig 60
LMT
h
1002 35DODECYL-BETA-D-MALTOSIDE
lig 61
LMT
k
101 35DODECYL-BETA-D-MALTOSIDE
lig 62
LMT
l
201 35DODECYL-BETA-D-MALTOSIDE
lig 63
LMT
m
201 35DODECYL-BETA-D-MALTOSIDE
lig 64
3PE
m
202 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
MYR
o
201 15MYRISTIC ACID
lig 66
CDL
q
201 76CARDIOLIPIN