Analysis of Ligand-Protein Contacts in PDB entry:
7RDW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 7RDW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
G
1 8PYROGLUTAMIC ACID
lig 2
PCA
U
1 8PYROGLUTAMIC ACID
lig 3
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
m
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
y
3 11BETA-D-MANNOPYRANOSE
lig 15
NAG
C
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
C
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
C
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
C
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
C
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
C
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
C
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NH4
C
608 1AMMONIUM ION
lig 23
NH4
C
609 1AMMONIUM ION
lig 24
EDO
C
610 41,2-ETHANEDIOL
lig 25
EDO
C
611 41,2-ETHANEDIOL
lig 26
SO4
C
612 5SULFATE ION
lig 27
NAG
D
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
D
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
D
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
D
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
D
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NH4
D
606 1AMMONIUM ION
lig 33
EDO
D
607 41,2-ETHANEDIOL
lig 34
SO4
D
608 5SULFATE ION
lig 35
EDO
H
301 41,2-ETHANEDIOL
lig 36
EDO
H
302 41,2-ETHANEDIOL
lig 37
NH4
I
301 1AMMONIUM ION
lig 38
NAG
M
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
M
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
M
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
M
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
M
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
M
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
SO4
M
607 5SULFATE ION
lig 45
NAG
N
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
N
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
N
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
N
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
N
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
N
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
N
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
N
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
N
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
N
610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
EDO
N
611 41,2-ETHANEDIOL