Analysis of Ligand-Protein Contacts in PDB entry:
7RFE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 7RFE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
GTP
A
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
ATP
A
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
IMP
A
604 23INOSINIC ACID
lig 5
GTP
B
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
GTP
B
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
ATP
B
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 8
IMP
B
604 23INOSINIC ACID
lig 9
GTP
C
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
GTP
C
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 11
ATP
C
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 12
IMP
C
604 23INOSINIC ACID
lig 13
GTP
D
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 14
GTP
D
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 15
ATP
D
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 16
IMP
D
604 23INOSINIC ACID
lig 17
GTP
E
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 18
GTP
E
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 19
ATP
E
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 20
IMP
E
604 23INOSINIC ACID
lig 21
GTP
F
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 22
GTP
F
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 23
ATP
F
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 24
IMP
F
604 23INOSINIC ACID
lig 25
GTP
G
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 26
GTP
G
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 27
ATP
G
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 28
IMP
G
604 23INOSINIC ACID
lig 29
GTP
H
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 30
GTP
H
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 31
ATP
H
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 32
IMP
H
604 23INOSINIC ACID