Analysis of Ligand-Protein Contacts in PDB entry:
7RGQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 7RGQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
NAD
A
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 3
IMP
A
603 23INOSINIC ACID
lig 4
ATP
A
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
GTP
A
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
GTP
B
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
NAD
B
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 8
IMP
B
603 23INOSINIC ACID
lig 9
ATP
B
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 10
GTP
B
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 11
GTP
C
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
NAD
C
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 13
IMP
C
603 23INOSINIC ACID
lig 14
ATP
C
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
GTP
C
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
GTP
D
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 17
NAD
D
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 18
IMP
D
603 23INOSINIC ACID
lig 19
ATP
D
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 20
GTP
D
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 21
GTP
E
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 22
NAD
E
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 23
IMP
E
603 23INOSINIC ACID
lig 24
ATP
E
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 25
GTP
E
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 26
GTP
F
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 27
NAD
F
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 28
IMP
F
603 23INOSINIC ACID
lig 29
ATP
F
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 30
GTP
F
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 31
GTP
G
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 32
NAD
G
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 33
IMP
G
603 23INOSINIC ACID
lig 34
ATP
G
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 35
GTP
G
605 32GUANOSINE-5'-TRIPHOSPHATE
lig 36
GTP
H
601 32GUANOSINE-5'-TRIPHOSPHATE
lig 37
NAD
H
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 38
IMP
H
603 23INOSINIC ACID
lig 39
ATP
H
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 40
GTP
H
605 32GUANOSINE-5'-TRIPHOSPHATE