Analysis of Ligand-Protein Contacts in PDB entry:
7TMB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 7TMB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
401 1SODIUM ION
lig 2
FMN
A
402 31FLAVIN MONONUCLEOTIDE
lig 3
PG4
A
403 13TETRAETHYLENE GLYCOL
lig 4
PG4
A
404 13TETRAETHYLENE GLYCOL
lig 5
NA
B
401 1SODIUM ION
lig 6
FMN
B
402 31FLAVIN MONONUCLEOTIDE
lig 7
FLC
B
403 13CITRATE ANION
lig 8
PG4
B
404 13TETRAETHYLENE GLYCOL
lig 9
PG4
B
405 13TETRAETHYLENE GLYCOL
lig 10
NA
C
401 1SODIUM ION
lig 11
FMN
C
402 31FLAVIN MONONUCLEOTIDE
lig 12
FLC
C
403 13CITRATE ANION
lig 13
FLC
C
404 13CITRATE ANION
lig 14
PG4
C
405 13TETRAETHYLENE GLYCOL
lig 15
PG4
C
406 13TETRAETHYLENE GLYCOL
lig 16
NA
D
401 1SODIUM ION
lig 17
FMN
D
402 31FLAVIN MONONUCLEOTIDE
lig 18
FLC
D
403 13CITRATE ANION
lig 19
PG4
D
404 13TETRAETHYLENE GLYCOL
lig 20
PG4
D
405 13TETRAETHYLENE GLYCOL
lig 21
NA
E
401 1SODIUM ION
lig 22
FMN
E
402 31FLAVIN MONONUCLEOTIDE
lig 23
FLC
E
403 13CITRATE ANION
lig 24
PG4
E
404 13TETRAETHYLENE GLYCOL
lig 25
PG4
E
405 13TETRAETHYLENE GLYCOL
lig 26
NA
F
401 1SODIUM ION
lig 27
FMN
F
402 31FLAVIN MONONUCLEOTIDE
lig 28
FLC
F
403 13CITRATE ANION
lig 29
PG4
F
404 13TETRAETHYLENE GLYCOL
lig 30
PG4
F
405 13TETRAETHYLENE GLYCOL