Analysis of Ligand-Protein Contacts in PDB entry:
7VB5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 59 ligands in PDB entry 7VB5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SNC
A
265 8S-NITROSO-CYSTEINE
lig 2
SNC
B
265 8S-NITROSO-CYSTEINE
lig 3
SNC
C
265 8S-NITROSO-CYSTEINE
lig 4
SNC
D
265 8S-NITROSO-CYSTEINE
lig 5
NAD
A
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 6
ZN
A
502 1ZINC ION
lig 7
ZN
A
503 1ZINC ION
lig 8
CNH
A
504 62-HYDROXY-2-METHYLPROPANENITRILE
lig 9
MG
A
505 1MAGNESIUM ION
lig 10
EDO
A
506 41,2-ETHANEDIOL
lig 11
EDO
A
507 41,2-ETHANEDIOL
lig 12
EDO
A
508 41,2-ETHANEDIOL
lig 13
EDO
A
509 41,2-ETHANEDIOL
lig 14
EDO
A
510 41,2-ETHANEDIOL
lig 15
EDO
A
511 41,2-ETHANEDIOL
lig 16
EDO
A
512 41,2-ETHANEDIOL
lig 17
EDO
A
513 41,2-ETHANEDIOL
lig 18
GOL
A
514 6GLYCEROL
lig 19
GOL
A
515 6GLYCEROL
lig 20
GOL
A
516 6GLYCEROL
lig 21
GOL
A
517 6GLYCEROL
lig 22
BTB
A
518 14 PROPANE-1,3-DIOL
lig 23
NAD
B
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 24
ZN
B
502 1ZINC ION
lig 25
ZN
B
503 1ZINC ION
lig 26
CNH
B
504 62-HYDROXY-2-METHYLPROPANENITRILE
lig 27
MG
B
505 1MAGNESIUM ION
lig 28
EDO
B
506 41,2-ETHANEDIOL
lig 29
EDO
B
507 41,2-ETHANEDIOL
lig 30
EDO
B
508 41,2-ETHANEDIOL
lig 31
EDO
B
509 41,2-ETHANEDIOL
lig 32
EDO
B
510 41,2-ETHANEDIOL
lig 33
EDO
B
511 41,2-ETHANEDIOL
lig 34
EDO
B
512 41,2-ETHANEDIOL
lig 35
EDO
B
513 41,2-ETHANEDIOL
lig 36
EDO
B
514 41,2-ETHANEDIOL
lig 37
EDO
B
515 41,2-ETHANEDIOL
lig 38
EDO
B
516 41,2-ETHANEDIOL
lig 39
EDO
B
517 41,2-ETHANEDIOL
lig 40
EDO
B
518 41,2-ETHANEDIOL
lig 41
EDO
B
519 41,2-ETHANEDIOL
lig 42
EDO
B
520 41,2-ETHANEDIOL
lig 43
EDO
B
521 41,2-ETHANEDIOL
lig 44
GOL
B
522 6GLYCEROL
lig 45
BTB
B
523 14 PROPANE-1,3-DIOL
lig 46
NAD
C
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 47
ZN
C
502 1ZINC ION
lig 48
ZN
C
503 1ZINC ION
lig 49
CNH
C
504 62-HYDROXY-2-METHYLPROPANENITRILE
lig 50
MG
C
505 1MAGNESIUM ION
lig 51
EDO
C
506 41,2-ETHANEDIOL
lig 52
EDO
C
507 41,2-ETHANEDIOL
lig 53
EDO
C
508 41,2-ETHANEDIOL
lig 54
NAD
D
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 55
ZN
D
502 1ZINC ION
lig 56
ZN
D
503 1ZINC ION
lig 57
MG
D
504 1MAGNESIUM ION
lig 58
EDO
D
505 41,2-ETHANEDIOL
lig 59
ACN
D
506 4ACETONE