Analysis of Ligand-Protein Contacts in PDB entry:
7VB7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 7VB7. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
2MR
Q
118 13N3, N4-DIMETHYLARGININE
lig 2
SF4
A
501 8IRON/SULFUR CLUSTER
lig 3
FMN
A
502 31FLAVIN MONONUCLEOTIDE
lig 4
NAI
A
503 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 5
SF4
B
301 8IRON/SULFUR CLUSTER
lig 6
SF4
B
302 8IRON/SULFUR CLUSTER
lig 7
SF4
C
301 8IRON/SULFUR CLUSTER
lig 8
PEE
C
302 471,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 9
PLX
C
303 52 PHOSPHAOCTACOSANE-6,6,11-TRIOL
lig 10
8Q1
E
201 35 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECA
lig 11
CDL
I
201 50CARDIOLIPIN
lig 12
NDP
J
401 48 PHOSPHATE
lig 13
UQ
J
402 33COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-
lig 14
SF4
M
801 8IRON/SULFUR CLUSTER
lig 15
SF4
M
802 8IRON/SULFUR CLUSTER
lig 16
FES
M
803 4FE2/S2 (INORGANIC) CLUSTER
lig 17
MG
M
804 1MAGNESIUM ION
lig 18
FES
O
301 4FE2/S2 (INORGANIC) CLUSTER
lig 19
DCQ
Q
501 23 DIONE
lig 20
ZN
T
201 1ZINC ION