Analysis of Ligand-Protein Contacts in PDB entry:
7VCF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 34 ligands in PDB entry 7VCF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
1795 11PHOSPHOTHREONINE
lig 2
SEP
B
339 10PHOSPHOSERINE
lig 3
SEP
B
344 10PHOSPHOSERINE
lig 4
TPO
C
328 11PHOSPHOTHREONINE
lig 5
TPO
F
564 11PHOSPHOTHREONINE
lig 6
TPO
H
176 11PHOSPHOTHREONINE
lig 7
TPO
H
177 11PHOSPHOTHREONINE
lig 8
TPO
H
178 11PHOSPHOTHREONINE
lig 9
SEP
T
42 10PHOSPHOSERINE
lig 10
TPO
T
77 11PHOSPHOTHREONINE
lig 11
TPO
T
168 11PHOSPHOTHREONINE
lig 12
SEP
T
173 10PHOSPHOSERINE
lig 13
SEP
T
212 10PHOSPHOSERINE
lig 14
SEP
T
229 10PHOSPHOSERINE
lig 15
TPO
T
239 11PHOSPHOTHREONINE
lig 16
SEP
T
244 10PHOSPHOSERINE
lig 17
TPO
T
249 11PHOSPHOTHREONINE
lig 18
SEP
T
251 10PHOSPHOSERINE
lig 19
SEP
T
505 10PHOSPHOSERINE
lig 20
TPO
T
510 11PHOSPHOTHREONINE
lig 21
SEP
T
514 10PHOSPHOSERINE
lig 22
TPO
T
523 11PHOSPHOTHREONINE
lig 23
SEP
T
537 10PHOSPHOSERINE
lig 24
SEP
T
706 10PHOSPHOSERINE
lig 25
TPO
T
708 11PHOSPHOTHREONINE
lig 26
TPO
T
712 11PHOSPHOTHREONINE
lig 27
SEP
T
714 10PHOSPHOSERINE
lig 28
LMG
A
2001 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 29
LMG
A
2002 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 30
LMG
A
2003 551,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 31
LMG
A
2004 551,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 32
IHP
A
2005 36INOSITOL HEXAKISPHOSPHATE
lig 33
MG
F
1001 1MAGNESIUM ION
lig 34
MG
T
1001 1MAGNESIUM ION