Analysis of Ligand-Protein Contacts in PDB entry:
7VFS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 7VFS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 10
R16
A
2401 16HEXADECANE
lig 11
R16
A
2402 16HEXADECANE
lig 12
R16
A
2403 16HEXADECANE
lig 13
Y01
A
2404 35CHOLESTEROL HEMISUCCINATE
lig 14
R16
A
2405 16HEXADECANE
lig 15
R16
A
2406 16HEXADECANE
lig 16
R16
A
2407 16HEXADECANE
lig 17
R16
A
2408 16HEXADECANE
lig 18
R16
A
2409 16HEXADECANE
lig 19
R16
A
2410 16HEXADECANE
lig 20
R16
A
2411 11HEXADECANE
lig 21
Y01
A
2412 35CHOLESTEROL HEMISUCCINATE
lig 22
R16
A
2413 13HEXADECANE
lig 23
R16
A
2414 15HEXADECANE
lig 24
R16
A
2415 13HEXADECANE
lig 25
R16
A
2416 12HEXADECANE
lig 26
R16
A
2417 15HEXADECANE
lig 27
R16
A
2418 13HEXADECANE
lig 28
R16
A
2419 16HEXADECANE
lig 29
R16
A
2420 16HEXADECANE
lig 30
Y01
A
2421 35CHOLESTEROL HEMISUCCINATE
lig 31
PT5
A
2422 62 ICOSA-5,8,11,14-TETRAENOATE
lig 32
CA
A
2423 1CALCIUM ION
lig 33
CA
B
1201 1CALCIUM ION
lig 34
NAG
B
1202 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
B
1203 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
B
1204 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
B
1205 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
B
1206 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
B
1207 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
B
1208 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
B
1209 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE