Analysis of Ligand-Protein Contacts in PDB entry:
7VMK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 7VMK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
CA
A
504 1CALCIUM ION
lig 5
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
B
502 1MAGNESIUM ION
lig 7
CA
B
503 1CALCIUM ION
lig 8
MES
B
504 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 9
MES
B
505 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 10
MG
B
506 1MAGNESIUM ION
lig 11
PEG
B
507 7DI(HYDROXYETHYL)ETHER
lig 12
7PL
B
508 30 YL]AMINO]PHENYL]CYCLOPROPANECARBOXAMIDE
lig 13
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 14
MG
C
502 1MAGNESIUM ION
lig 15
CA
C
503 1CALCIUM ION
lig 16
GDP
D
600 28GUANOSINE-5'-DIPHOSPHATE
lig 17
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST