Analysis of Ligand-Protein Contacts in PDB entry:
7VNV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 7VNV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
4AC
A
6 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 2
4SU
A
8 204-THIOURIDINE-5'-MONOPHOSPHATE
lig 3
2MG
A
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
PSU
A
13 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
7SN
A
15 26 BIS(OXIDANYL)OXOLAN-2-YL]METHYL DIHYDROGE
lig 6
OMC
A
17 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 7
M2G
A
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 8
OMC
A
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 9
OMU
A
34 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 10
9QV
A
47 24URIDINE 2',5'-BIS(DIHYDROGEN PHOSPHATE)
lig 11
5MC
A
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
5MC
A
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 13
SUR
A
54 201-(BETA-D-RIBOFURANOSYL)-2-THIO-URACIL-5'-
lig 14
PSU
A
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 15
OMC
A
56 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 16
7S3
A
57 23 PHOSPHATE
lig 17
1MA
A
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 18
4AC
B
6 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 19
4SU
B
8 204-THIOURIDINE-5'-MONOPHOSPHATE
lig 20
2MG
B
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 21
PSU
B
13 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 22
7SN
B
15 26 BIS(OXIDANYL)OXOLAN-2-YL]METHYL DIHYDROGE
lig 23
OMC
B
17 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 24
M2G
B
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 25
OMC
B
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 26
OMU
B
34 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 27
9QV
B
47 24URIDINE 2',5'-BIS(DIHYDROGEN PHOSPHATE)
lig 28
5MC
B
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 29
5MC
B
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 30
SUR
B
54 201-(BETA-D-RIBOFURANOSYL)-2-THIO-URACIL-5'-
lig 31
PSU
B
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 32
OMC
B
56 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 33
7S3
B
57 23 PHOSPHATE
lig 34
1MA
B
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE