Analysis of Ligand-Protein Contacts in PDB entry:
7VSO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 7VSO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RET
A
301 20RETINAL
lig 2
7YH
A
302 41 PHOSPHORYL]OXYETHYL-TRIMETHYL-AZANIUM
lig 3
IOD
A
303 1IODIDE ION
lig 4
CPS
A
304 27 PROPANESULFONATE
lig 5
OCT
A
305 8N-OCTANE
lig 6
HP6
A
306 7HEPTANE
lig 7
D12
A
307 12DODECANE
lig 8
R16
A
308 16HEXADECANE
lig 9
D10
A
309 10DECANE
lig 10
R16
A
310 16HEXADECANE
lig 11
HP6
A
311 7HEPTANE
lig 12
HP6
A
313 7HEPTANE
lig 13
HP6
A
314 7HEPTANE
lig 14
DD9
A
315 9NONANE
lig 15
D12
A
316 12DODECANE
lig 16
D12
A
317 12DODECANE
lig 17
R16
A
318 16HEXADECANE
lig 18
HP6
A
319 7HEPTANE
lig 19
OCT
A
320 8N-OCTANE