Analysis of Ligand-Protein Contacts in PDB entry:
7VY3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 93 ligands in PDB entry 7VY3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
D
1 10N-FORMYLMETHIONINE
lig 3
FME
F
1 10N-FORMYLMETHIONINE
lig 4
FME
I
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
O
1 10N-FORMYLMETHIONINE
lig 7
FME
Q
1 10N-FORMYLMETHIONINE
lig 8
FME
S
1 7N-FORMYLMETHIONINE
lig 9
BCL
L
301 66BACTERIOCHLOROPHYLL A
lig 10
BPH
L
302 65BACTERIOPHEOPHYTIN A
lig 11
U10
L
303 35UBIQUINONE-10
lig 12
U10
L
304 28UBIQUINONE-10
lig 13
PGV
L
305 39 OCTADEC-11-ENOATE
lig 14
LDA
L
306 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 15
LMT
L
307 35DODECYL-BETA-D-MALTOSIDE
lig 16
LMT
L
308 34DODECYL-BETA-D-MALTOSIDE
lig 17
BCL
L
309 66BACTERIOCHLOROPHYLL A
lig 18
BCL
M
401 66BACTERIOCHLOROPHYLL A
lig 19
BCL
M
402 66BACTERIOCHLOROPHYLL A
lig 20
BPH
M
403 65BACTERIOPHEOPHYTIN A
lig 21
FE
M
404 1FE (III) ION
lig 22
SPO
M
405 42SPHEROIDENE
lig 23
LMT
M
406 27DODECYL-BETA-D-MALTOSIDE
lig 24
LMT
M
407 25DODECYL-BETA-D-MALTOSIDE
lig 25
CDL
M
408 79CARDIOLIPIN
lig 26
PGV
M
409 38 OCTADEC-11-ENOATE
lig 27
U10
M
410 63UBIQUINONE-10
lig 28
PGV
H
301 47 OCTADEC-11-ENOATE
lig 29
LDA
H
302 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 30
LMT
H
303 35DODECYL-BETA-D-MALTOSIDE
lig 31
LMT
H
304 35DODECYL-BETA-D-MALTOSIDE
lig 32
LMT
H
305 30DODECYL-BETA-D-MALTOSIDE
lig 33
PTY
H
306 46PHOSPHATIDYLETHANOLAMINE
lig 34
CDL
H
307 61CARDIOLIPIN
lig 35
LMT
A
101 35DODECYL-BETA-D-MALTOSIDE
lig 36
LMT
A
102 35DODECYL-BETA-D-MALTOSIDE
lig 37
BCL
A
103 61BACTERIOCHLOROPHYLL A
lig 38
SPO
B
101 42SPHEROIDENE
lig 39
LMT
B
102 27DODECYL-BETA-D-MALTOSIDE
lig 40
BCL
B
103 66BACTERIOCHLOROPHYLL A
lig 41
SPO
B
104 42SPHEROIDENE
lig 42
BCL
D
101 66BACTERIOCHLOROPHYLL A
lig 43
SPO
D
102 42SPHEROIDENE
lig 44
LMT
D
103 27DODECYL-BETA-D-MALTOSIDE
lig 45
SPO
D
104 42SPHEROIDENE
lig 46
U10
D
105 63UBIQUINONE-10
lig 47
BCL
E
101 66BACTERIOCHLOROPHYLL A
lig 48
BCL
F
101 66BACTERIOCHLOROPHYLL A
lig 49
PGV
F
102 40 OCTADEC-11-ENOATE
lig 50
PGV
F
103 47 OCTADEC-11-ENOATE
lig 51
PTY
F
104 48PHOSPHATIDYLETHANOLAMINE
lig 52
SPO
F
105 42SPHEROIDENE
lig 53
LMT
F
106 17DODECYL-BETA-D-MALTOSIDE
lig 54
BCL
G
101 66BACTERIOCHLOROPHYLL A
lig 55
SPO
G
102 42SPHEROIDENE
lig 56
SPO
G
103 42SPHEROIDENE
lig 57
LMT
I
101 26DODECYL-BETA-D-MALTOSIDE
lig 58
BCL
I
102 66BACTERIOCHLOROPHYLL A
lig 59
LMT
I
103 27DODECYL-BETA-D-MALTOSIDE
lig 60
BCL
J
101 66BACTERIOCHLOROPHYLL A
lig 61
SPO
J
102 42SPHEROIDENE
lig 62
LMT
K
101 35DODECYL-BETA-D-MALTOSIDE
lig 63
BCL
K
102 66BACTERIOCHLOROPHYLL A
lig 64
SPO
K
103 42SPHEROIDENE
lig 65
PGV
K
104 41 OCTADEC-11-ENOATE
lig 66
SPO
K
105 42SPHEROIDENE
lig 67
BCL
N
101 66BACTERIOCHLOROPHYLL A
lig 68
BCL
O
101 66BACTERIOCHLOROPHYLL A
lig 69
SPO
O
102 42SPHEROIDENE
lig 70
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 71
SPO
P
102 42SPHEROIDENE
lig 72
LMT
Q
101 24DODECYL-BETA-D-MALTOSIDE
lig 73
LMT
Q
102 19DODECYL-BETA-D-MALTOSIDE
lig 74
PGV
Q
103 39 OCTADEC-11-ENOATE
lig 75
BCL
Q
104 66BACTERIOCHLOROPHYLL A
lig 76
SPO
Q
105 42SPHEROIDENE
lig 77
BCL
Q
106 66BACTERIOCHLOROPHYLL A
lig 78
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 79
SPO
S
102 42SPHEROIDENE
lig 80
SPO
S
103 42SPHEROIDENE
lig 81
BCL
T
101 66BACTERIOCHLOROPHYLL A
lig 82
BCL
V
101 66BACTERIOCHLOROPHYLL A
lig 83
SPO
V
102 42SPHEROIDENE
lig 84
SPO
V
103 42SPHEROIDENE
lig 85
BCL
W
101 66BACTERIOCHLOROPHYLL A
lig 86
LDA
Y
101 12LAURYL DIMETHYLAMINE-N-OXIDE
lig 87
CDL
Y
102 35CARDIOLIPIN
lig 88
BCL
Y
103 66BACTERIOCHLOROPHYLL A
lig 89
PGV
Y
104 43 OCTADEC-11-ENOATE
lig 90
SPO
Z
101 42SPHEROIDENE
lig 91
BCL
Z
102 66BACTERIOCHLOROPHYLL A
lig 92
BCL
1
101 66BACTERIOCHLOROPHYLL A
lig 93
LDA
X
101 13LAURYL DIMETHYLAMINE-N-OXIDE