Analysis of Ligand-Protein Contacts in PDB entry:
7XDJ

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 7XDJ. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	BRU	B	7	20	5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 2	BRU	F	7	20	5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 3	BRU	J	7	20	5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 4	DSN	L	1	6	D-SERINE
lig 5	N2C	L	3	8	N,S-DIMETHYLCYSTEINE
lig 6	MVA	L	4	8	N-METHYLVALINE
lig 7	DSN	L	5	6	D-SERINE
lig 8	NCY	L	7	7	N-METHYLCYSTEINE
lig 9	MVA	L	8	8	N-METHYLVALINE
lig 10	BRU	N	7	20	5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 11	DSN	P	1	6	D-SERINE
lig 12	N2C	P	3	8	N,S-DIMETHYLCYSTEINE
lig 13	MVA	P	4	8	N-METHYLVALINE
lig 14	DSN	P	5	6	D-SERINE
lig 15	NCY	P	7	7	N-METHYLCYSTEINE
lig 16	MVA	P	8	8	N-METHYLVALINE
lig 17	DVA	C	2	7	D-VALINE
lig 18	SAR	C	4	5	SARCOSINE
lig 19	MVA	C	5	8	N-METHYLVALINE
lig 20	PXZ	C	6	22	PHENOXAZIN-3-ONE
lig 21	DVA	C	8	7	D-VALINE
lig 22	SAR	C	10	5	SARCOSINE
lig 23	MVA	C	11	8	N-METHYLVALINE
lig 24	DVA	G	2	7	D-VALINE
lig 25	SAR	G	4	5	SARCOSINE
lig 26	MVA	G	5	8	N-METHYLVALINE
lig 27	PXZ	G	6	22	PHENOXAZIN-3-ONE
lig 28	DVA	G	8	7	D-VALINE
lig 29	SAR	G	10	5	SARCOSINE
lig 30	MVA	G	11	8	N-METHYLVALINE
lig 31	DVA	K	2	7	D-VALINE
lig 32	SAR	K	4	5	SARCOSINE
lig 33	MVA	K	5	8	N-METHYLVALINE
lig 34	PXZ	K	6	22	PHENOXAZIN-3-ONE
lig 35	DVA	K	8	7	D-VALINE
lig 36	SAR	K	10	5	SARCOSINE
lig 37	MVA	K	11	8	N-METHYLVALINE
lig 38	DVA	O	2	7	D-VALINE
lig 39	SAR	O	4	5	SARCOSINE
lig 40	MVA	O	5	8	N-METHYLVALINE
lig 41	PXZ	O	6	22	PHENOXAZIN-3-ONE
lig 42	DVA	O	8	7	D-VALINE
lig 43	SAR	O	10	5	SARCOSINE
lig 44	MVA	O	11	8	N-METHYLVALINE
lig 45	DSN	D	1	6	D-SERINE
lig 46	N2C	D	3	8	N,S-DIMETHYLCYSTEINE
lig 47	MVA	D	4	8	N-METHYLVALINE
lig 48	DSN	D	5	6	D-SERINE
lig 49	NCY	D	7	7	N-METHYLCYSTEINE
lig 50	MVA	D	8	8	N-METHYLVALINE
lig 51	DSN	H	1	6	D-SERINE
lig 52	N2C	H	3	8	N,S-DIMETHYLCYSTEINE
lig 53	MVA	H	4	8	N-METHYLVALINE
lig 54	DSN	H	5	6	D-SERINE
lig 55	NCY	H	7	7	N-METHYLCYSTEINE
lig 56	MVA	H	8	8	N-METHYLVALINE
lig 57	CL	A	101	1	CHLORIDE ION
lig 58	MG	A	102	1	MAGNESIUM ION
lig 59	CL	J	101	1	CHLORIDE ION
lig 60	MG	J	102	1	MAGNESIUM ION
lig 61	QUI	L	101	12	2-CARBOXYQUINOXALINE
lig 62	QUI	L	102	12	2-CARBOXYQUINOXALINE
lig 63	CL	N	101	1	CHLORIDE ION
lig 64	MG	N	102	1	MAGNESIUM ION
lig 65	QUI	P	101	12	2-CARBOXYQUINOXALINE
lig 66	QUI	P	102	12	2-CARBOXYQUINOXALINE
lig 67	QUI	D	101	12	2-CARBOXYQUINOXALINE
lig 68	QUI	D	102	12	2-CARBOXYQUINOXALINE
lig 69	QUI	H	101	12	2-CARBOXYQUINOXALINE
lig 70	QUI	H	102	12	2-CARBOXYQUINOXALINE

Analysis of Ligand-Protein Contacts in PDB entry: 7XDJ

Analysis of Ligand-Protein Contacts in PDB entry:
7XDJ