Analysis of Ligand-Protein Contacts in PDB entry:
7YML

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 98 ligands in PDB entry 7YML. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	A	1	10	N-FORMYLMETHIONINE
lig 2	FME	D	1	10	N-FORMYLMETHIONINE
lig 3	FME	F	1	10	N-FORMYLMETHIONINE
lig 4	FME	I	1	10	N-FORMYLMETHIONINE
lig 5	FME	K	1	10	N-FORMYLMETHIONINE
lig 6	FME	O	1	10	N-FORMYLMETHIONINE
lig 7	FME	Q	1	10	N-FORMYLMETHIONINE
lig 8	FME	S	1	7	N-FORMYLMETHIONINE
lig 9	FME	V	1	10	N-FORMYLMETHIONINE
lig 10	BCL	L	301	66	BACTERIOCHLOROPHYLL A
lig 11	BPH	L	302	65	BACTERIOPHEOPHYTIN A
lig 12	U10	L	303	48	UBIQUINONE-10
lig 13	U10	L	304	63	UBIQUINONE-10
lig 14	PGV	L	305	39	OCTADEC-11-ENOATE
lig 15	PEE	L	306	46	1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 16	LDA	L	307	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 17	LMT	L	308	35	DODECYL-BETA-D-MALTOSIDE
lig 18	LMT	L	309	34	DODECYL-BETA-D-MALTOSIDE
lig 19	BCL	L	310	66	BACTERIOCHLOROPHYLL A
lig 20	LMT	L	311	35	DODECYL-BETA-D-MALTOSIDE
lig 21	U10	M	401	20	UBIQUINONE-10
lig 22	PGV	M	402	36	OCTADEC-11-ENOATE
lig 23	BCL	M	403	66	BACTERIOCHLOROPHYLL A
lig 24	BCL	M	404	66	BACTERIOCHLOROPHYLL A
lig 25	BPH	M	405	65	BACTERIOPHEOPHYTIN A
lig 26	FE	M	406	1	FE (III) ION
lig 27	U10	M	407	48	UBIQUINONE-10
lig 28	SPO	M	408	42	SPHEROIDENE
lig 29	LMT	M	409	24	DODECYL-BETA-D-MALTOSIDE
lig 30	LMT	M	410	35	DODECYL-BETA-D-MALTOSIDE
lig 31	LMT	M	411	35	DODECYL-BETA-D-MALTOSIDE
lig 32	LMT	M	412	32	DODECYL-BETA-D-MALTOSIDE
lig 33	PGV	M	413	45	OCTADEC-11-ENOATE
lig 34	PGV	M	414	35	OCTADEC-11-ENOATE
lig 35	PGV	M	415	38	OCTADEC-11-ENOATE
lig 36	LDA	M	416	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 37	LMT	M	417	33	DODECYL-BETA-D-MALTOSIDE
lig 38	LDA	M	418	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 39	LDA	M	419	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 40	LDA	M	420	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 41	LDA	H	301	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 42	LDA	H	302	14	LAURYL DIMETHYLAMINE-N-OXIDE
lig 43	PGV	H	303	43	OCTADEC-11-ENOATE
lig 44	PGV	H	304	34	OCTADEC-11-ENOATE
lig 45	BCL	A	101	61	BACTERIOCHLOROPHYLL A
lig 46	LMT	A	102	32	DODECYL-BETA-D-MALTOSIDE
lig 47	BCL	B	101	66	BACTERIOCHLOROPHYLL A
lig 48	SPO	D	101	42	SPHEROIDENE
lig 49	BCL	D	102	66	BACTERIOCHLOROPHYLL A
lig 50	SPO	D	103	42	SPHEROIDENE
lig 51	LDA	D	104	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 52	SPO	D	105	42	SPHEROIDENE
lig 53	SPO	E	101	42	SPHEROIDENE
lig 54	BCL	E	102	66	BACTERIOCHLOROPHYLL A
lig 55	BCL	F	101	66	BACTERIOCHLOROPHYLL A
lig 56	MYR	F	102	16	MYRISTIC ACID
lig 57	BCL	F	103	66	BACTERIOCHLOROPHYLL A
lig 58	SPO	F	104	42	SPHEROIDENE
lig 59	BCL	G	101	66	BACTERIOCHLOROPHYLL A
lig 60	SPO	G	102	42	SPHEROIDENE
lig 61	LMT	I	101	35	DODECYL-BETA-D-MALTOSIDE
lig 62	BCL	I	102	66	BACTERIOCHLOROPHYLL A
lig 63	SPO	I	103	42	SPHEROIDENE
lig 64	SPO	I	104	42	SPHEROIDENE
lig 65	BCL	J	101	66	BACTERIOCHLOROPHYLL A
lig 66	LMT	K	101	35	DODECYL-BETA-D-MALTOSIDE
lig 67	BCL	K	102	66	BACTERIOCHLOROPHYLL A
lig 68	SPO	N	101	42	SPHEROIDENE
lig 69	BCL	N	102	66	BACTERIOCHLOROPHYLL A
lig 70	LDA	O	101	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 71	BCL	O	102	66	BACTERIOCHLOROPHYLL A
lig 72	SPO	O	103	42	SPHEROIDENE
lig 73	SPO	O	104	42	SPHEROIDENE
lig 74	SPO	P	101	42	SPHEROIDENE
lig 75	BCL	P	102	66	BACTERIOCHLOROPHYLL A
lig 76	LMT	Q	101	35	DODECYL-BETA-D-MALTOSIDE
lig 77	LDA	Q	102	9	LAURYL DIMETHYLAMINE-N-OXIDE
lig 78	PGV	Q	103	35	OCTADEC-11-ENOATE
lig 79	LDA	Q	104	12	LAURYL DIMETHYLAMINE-N-OXIDE
lig 80	BCL	Q	105	66	BACTERIOCHLOROPHYLL A
lig 81	SPO	R	101	42	SPHEROIDENE
lig 82	BCL	R	102	66	BACTERIOCHLOROPHYLL A
lig 83	LMT	S	101	26	DODECYL-BETA-D-MALTOSIDE
lig 84	LMT	S	102	33	DODECYL-BETA-D-MALTOSIDE
lig 85	BCL	S	103	66	BACTERIOCHLOROPHYLL A
lig 86	SPO	S	104	42	SPHEROIDENE
lig 87	SPO	S	105	42	SPHEROIDENE
lig 88	SPO	T	101	42	SPHEROIDENE
lig 89	BCL	T	102	66	BACTERIOCHLOROPHYLL A
lig 90	BCL	V	101	66	BACTERIOCHLOROPHYLL A
lig 91	SPO	W	101	42	SPHEROIDENE
lig 92	BCL	W	102	66	BACTERIOCHLOROPHYLL A
lig 93	LMT	Y	101	28	DODECYL-BETA-D-MALTOSIDE
lig 94	BCL	Y	102	66	BACTERIOCHLOROPHYLL A
lig 95	LMT	Y	103	27	DODECYL-BETA-D-MALTOSIDE
lig 96	BCL	Z	101	66	BACTERIOCHLOROPHYLL A
lig 97	LMT	X	101	35	DODECYL-BETA-D-MALTOSIDE
lig 98	LMT	X	102	35	DODECYL-BETA-D-MALTOSIDE

Analysis of Ligand-Protein Contacts in PDB entry: 7YML

Analysis of Ligand-Protein Contacts in PDB entry:
7YML