Analysis of Ligand-Protein Contacts in PDB entry:
7YPM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 7YPM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
501 15PYRIDOXAL-5'-PHOSPHATE
lig 2
ALA
A
502 6ALANINE
lig 3
EDO
A
503 41,2-ETHANEDIOL
lig 4
PLP
B
501 15PYRIDOXAL-5'-PHOSPHATE
lig 5
ALA
B
502 6ALANINE
lig 6
ALA
B
503 6ALANINE
lig 7
PLP
C
501 15PYRIDOXAL-5'-PHOSPHATE
lig 8
PEG
C
502 7DI(HYDROXYETHYL)ETHER
lig 9
ALA
C
503 6ALANINE
lig 10
PLP
D
501 15PYRIDOXAL-5'-PHOSPHATE
lig 11
ALA
D
502 6ALANINE
lig 12
ALA
D
503 6ALANINE