Analysis of Ligand-Protein Contacts in PDB entry:
7YZM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 59 ligands in PDB entry 7YZM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BJ8
A
501 17DOUBLE CUBANE CLUSTER
lig 2
SO4
A
502 5SULFATE ION
lig 3
NH4
A
503 1AMMONIUM ION
lig 4
SO4
A
504 5SULFATE ION
lig 5
SO4
A
505 5SULFATE ION
lig 6
PEG
A
506 7DI(HYDROXYETHYL)ETHER
lig 7
PEG
A
507 7DI(HYDROXYETHYL)ETHER
lig 8
BU3
A
508 6(R,R)-2,3-BUTANEDIOL
lig 9
BU3
A
509 6(R,R)-2,3-BUTANEDIOL
lig 10
NH4
A
510 1AMMONIUM ION
lig 11
BJ8
B
501 17DOUBLE CUBANE CLUSTER
lig 12
SO4
B
502 5SULFATE ION
lig 13
SO4
B
503 5SULFATE ION
lig 14
TAM
B
504 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 15
NH4
B
505 1AMMONIUM ION
lig 16
NH4
B
506 1AMMONIUM ION
lig 17
BU3
B
507 6(R,R)-2,3-BUTANEDIOL
lig 18
MG
G
301 1MAGNESIUM ION
lig 19
ANP
G
302 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 20
SO4
G
303 5SULFATE ION
lig 21
NH4
G
304 1AMMONIUM ION
lig 22
BU3
G
305 6(R,R)-2,3-BUTANEDIOL
lig 23
BU3
G
306 6(R,R)-2,3-BUTANEDIOL
lig 24
BU3
G
307 6(R,R)-2,3-BUTANEDIOL
lig 25
BU3
G
308 6(R,R)-2,3-BUTANEDIOL
lig 26
SF4
H
301 8IRON/SULFUR CLUSTER
lig 27
MG
H
302 1MAGNESIUM ION
lig 28
ANP
H
303 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 29
BU3
H
304 6(R,R)-2,3-BUTANEDIOL
lig 30
BU3
H
305 6(R,R)-2,3-BUTANEDIOL
lig 31
BJ8
C
501 17DOUBLE CUBANE CLUSTER
lig 32
SO4
C
502 5SULFATE ION
lig 33
SO4
C
503 5SULFATE ION
lig 34
SO4
C
504 5SULFATE ION
lig 35
SO4
C
505 5SULFATE ION
lig 36
PEG
C
506 7DI(HYDROXYETHYL)ETHER
lig 37
BU3
C
507 6(R,R)-2,3-BUTANEDIOL
lig 38
BU3
C
508 6(R,R)-2,3-BUTANEDIOL
lig 39
BU3
C
509 6(R,R)-2,3-BUTANEDIOL
lig 40
BJ8
D
501 17DOUBLE CUBANE CLUSTER
lig 41
SO4
D
502 5SULFATE ION
lig 42
NH4
D
503 1AMMONIUM ION
lig 43
SO4
D
504 5SULFATE ION
lig 44
PEG
D
505 7DI(HYDROXYETHYL)ETHER
lig 45
BU3
D
506 6(R,R)-2,3-BUTANEDIOL
lig 46
BU3
D
507 6(R,R)-2,3-BUTANEDIOL
lig 47
TAM
D
508 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 48
SF4
E
301 8IRON/SULFUR CLUSTER
lig 49
MG
E
302 1MAGNESIUM ION
lig 50
ANP
E
303 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 51
SO4
E
304 5SULFATE ION
lig 52
BU3
E
305 6(R,R)-2,3-BUTANEDIOL
lig 53
SO4
F
301 5SULFATE ION
lig 54
MG
F
302 1MAGNESIUM ION
lig 55
ANP
F
303 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 56
SO4
F
304 5SULFATE ION
lig 57
BU3
F
305 6(R,R)-2,3-BUTANEDIOL
lig 58
BU3
F
306 6(R,R)-2,3-BUTANEDIOL
lig 59
BU3
F
307 6(R,R)-2,3-BUTANEDIOL