Analysis of Ligand-Protein Contacts in PDB entry:
7ZEB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 29 ligands in PDB entry 7ZEB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MR
4
85 13N3, N4-DIMETHYLARGININE
lig 2
FME
K
1 10N-FORMYLMETHIONINE
lig 3
FME
L
1 10N-FORMYLMETHIONINE
lig 4
FME
M
1 10N-FORMYLMETHIONINE
lig 5
AYA
V
1 8N-ACETYLALANINE
lig 6
SEP
k
36 10PHOSPHOSERINE
lig 7
AYA
h
1 8N-ACETYLALANINE
lig 8
PC1
H
401 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 9
PC1
L
701 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PC1
M
501 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
ZMP
X
101 31 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 12
AMP
k
501 23ADENOSINE MONOPHOSPHATE
lig 13
MYR
s
201 15MYRISTIC ACID
lig 14
PC1
w
801 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
SF4
1
501 8IRON/SULFUR CLUSTER
lig 16
FMN
1
502 31FLAVIN MONONUCLEOTIDE
lig 17
NAI
1
503 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 18
FES
2
300 4FE2/S2 (INORGANIC) CLUSTER
lig 19
SF4
3
801 8IRON/SULFUR CLUSTER
lig 20
SF4
3
802 8IRON/SULFUR CLUSTER
lig 21
FES
3
803 4FE2/S2 (INORGANIC) CLUSTER
lig 22
K
3
804 1POTASSIUM ION
lig 23
SF4
6
300 8IRON/SULFUR CLUSTER
lig 24
SF4
9
201 8IRON/SULFUR CLUSTER
lig 25
SF4
9
202 8IRON/SULFUR CLUSTER
lig 26
ZN
b
300 1ZINC ION
lig 27
PC1
d
401 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
NDP
d
402 48 PHOSPHATE
lig 29
ZMP
j
101 34 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD