Analysis of Ligand-Protein Contacts in PDB entry:
8B8E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 35 ligands in PDB entry 8B8E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
EDO
A
301 41,2-ETHANEDIOL
lig 2
EDO
A
302 41,2-ETHANEDIOL
lig 3
PEG
A
303 7DI(HYDROXYETHYL)ETHER
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
PGE
A
305 10TRIETHYLENE GLYCOL
lig 6
EDO
A
306 41,2-ETHANEDIOL
lig 7
EDO
A
307 41,2-ETHANEDIOL
lig 8
EDO
A
308 41,2-ETHANEDIOL
lig 9
EDO
A
309 41,2-ETHANEDIOL
lig 10
NA
A
310 1SODIUM ION
lig 11
GOL
B
301 6GLYCEROL
lig 12
EDO
B
302 41,2-ETHANEDIOL
lig 13
GOL
B
303 6GLYCEROL
lig 14
EDO
B
304 41,2-ETHANEDIOL
lig 15
PEG
B
305 7DI(HYDROXYETHYL)ETHER
lig 16
GOL
B
306 6GLYCEROL
lig 17
144
B
307 8TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
lig 18
GOL
B
308 6GLYCEROL
lig 19
EDO
B
309 41,2-ETHANEDIOL
lig 20
EDO
B
310 41,2-ETHANEDIOL
lig 21
NA
B
311 1SODIUM ION
lig 22
EDO
C
301 41,2-ETHANEDIOL
lig 23
EDO
C
302 41,2-ETHANEDIOL
lig 24
PEG
C
303 7DI(HYDROXYETHYL)ETHER
lig 25
EDO
C
304 41,2-ETHANEDIOL
lig 26
EDO
C
305 41,2-ETHANEDIOL
lig 27
PO4
D
301 5PHOSPHATE ION
lig 28
NA
D
302 1SODIUM ION
lig 29
NA
D
303 1SODIUM ION
lig 30
EDO
E
301 41,2-ETHANEDIOL
lig 31
GOL
E
302 6GLYCEROL
lig 32
GOL
E
303 6GLYCEROL
lig 33
PEG
E
304 7DI(HYDROXYETHYL)ETHER
lig 34
EDO
E
305 41,2-ETHANEDIOL
lig 35
NA
E
306 1SODIUM ION